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AT1G15470 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15470" - Transducin/WD40 repeat-like superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G15470Transducin/WD40 repeat-like superfamily protein; Contains the following InterPro domains- WD40 repeat 2 (InterPro-IPR019782), WD40 repeat-like-containing domain (InterPro-IPR011046), WD40 repeat, conserved site (InterPro-IPR019775), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), WD40 repeat, subgroup (InterPro-IPR019781); BEST Arabidopsis thaliana protein match is- Transducin/WD40 repeat-like superfamily protein (TAIR-AT3G15610.1); Has 41653 Blast hits to 22434 proteins in 735 species- [...] (333 aa)    
Predicted Functional Partners:
AT3G15610
Transducin/WD40 repeat-like superfamily protein; Contains the following InterPro domains- WD40 repeat 2 (InterPro-IPR019782), WD40 repeat-like-containing domain (InterPro-IPR011046), WD40 repeat, conserved site (InterPro-IPR019775), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), WD40 repeat, subgroup (InterPro-IPR019781); BEST Arabidopsis thaliana protein match is- Transducin/WD40 repeat-like superfamily protein (TAIR-AT1G52730.1); Has 43706 Blast hits to 23089 proteins in 800 species- [...] (341 aa)
   
   
 
0.801
AT1G52730
Transducin/WD40 repeat-like superfamily protein; Contains the following InterPro domains- WD40 repeat 2 (InterPro-IPR019782), WD40 repeat-like-containing domain (InterPro-IPR011046), WD40 repeat, conserved site (InterPro-IPR019775), WD40-repeat-containing domain (InterPro-IPR017986), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943), WD40 repeat (InterPro-IPR001680), WD40 repeat, subgroup (InterPro-IPR019781); BEST Arabidopsis thaliana protein match is- Transducin/WD40 repeat-like superfamily protein (TAIR-AT3G15610.1); Has 41491 Blast hits to 21864 proteins in 790 species- [...] (343 aa)
   
   
 
0.801
AT2G37020
Translin family protein; Its function is described as sequence-specific DNA binding, DNA binding; Involved in biological_process unknown; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Translin, C-terminal (InterPro-IPR016069), Translin (InterPro-IPR002848), Translin, N-terminal (InterPro-IPR016068) (310 aa)
     
      0.733
AT5G20890
TCP-1/cpn60 chaperonin family protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis. Known to play a role, in vitro, in the folding of actin and tubulin (527 aa)
     
        0.633
STV1
RPL24B encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B. Mutants showed defects in apical-basal gynoecium patterning similar to previously described ett and mp mutants. Transformation of stv1-1 mutant with a uORF-eliminated ETT construct partially suppressed the stv1 gynoecium phenotype, implying that STV1 could influence ETT translation through its uORFs. Regulated by TCP20 (163 aa)
     
      0.621
RPL24A
RPL24A encodes ribosomal protein L24, homolog of cytosolic RPL24, found in archaea and higher eukaryotes. Arabidopsis has two RPL24 homologs, RPL24A (AT2G36620) and RPL24B (AT3G53020) (164 aa)
     
      0.621
AT2G42510
Survival motor neuron interacting protein; Its function is described as molecular_function unknown; Involved in spliceosome assembly, nuclear mRNA splicing, via spliceosome; Located in cellular_component unknown; Contains the following InterPro domains- Survival motor neuron interacting protein 1 (InterPro-IPR007022); BEST Arabidopsis thaliana protein match is- spliceosome protein-related (TAIR-AT1G54380.1); Has 297 Blast hits to 270 proteins in 80 species- Archae - 2; Bacteria - 35; Metazoa - 62; Fungi - 11; Plants - 64; Viruses - 0; Other Eukaryotes - 123 (source- NCBI BLink) (653 aa)
       
 
  0.600
AT1G54380
Uncharacterized protein At1g54380; Spliceosome protein-related; Its function is described as molecular_function unknown; Involved in spliceosome assembly, nuclear mRNA splicing, via spliceosome; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Survival motor neuron interacting protein 1 (InterPro-IPR007022); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G42510.2); Has 222 Blast hits to 205 proteins in 80 species- Archae - 0; Bacteria - 6; Metazoa - 98; Fungi - 6; P [...] (515 aa)
       
 
  0.600
UBA2
Ubiquitin-activating enzyme E1 2; Activates ubiquitin by first adenylating its C-terminal glycine residue with ATP, and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding a ubiquitin- E1 thioester and free AMP (1077 aa)
     
      0.553
UBA1
Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. Mutant is able to revert the constitutive defense responses phenotype of snc1, which indicates the gene is involved in defense response. It also indicates that ubiquitination plays a role in plant defense signalling (1080 aa)
     
      0.553
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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