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ECB2 protein (Arabidopsis thaliana) - STRING interaction network
"ECB2" - EARLY CHLOROPLAST BIOGENESIS2 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECB2EARLY CHLOROPLAST BIOGENESIS2 (866 aa)    
Predicted Functional Partners:
ACCD
acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA (488 aa)
           
  0.810
EMB3120
EMBRYO DEFECTIVE 3120 (611 aa)
     
   
  0.770
AT3G15610
transducin/WD40 domain-containing protein (341 aa)
           
  0.710
AT1G52730
transducin/WD-40 repeat-containing protein (343 aa)
           
  0.710
RPOB
RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1072 aa)
     
   
  0.698
FLN2
Fructokinase-like 2; Required for proper chloroplast development, most likely through regulating plastid-encoded polymerase (PEP) dependent chloroplast transcription. Acts as a component of the transcriptionally active plastid chromosome that is required for plastid gene expression (616 aa)
     
   
  0.683
NDHD
NADH-Ubiquinone/plastoquinone (complex I) protein.[Source-TAIR;Acc-ATCG01050] (506 aa)
           
  0.673
RPOA
RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (329 aa)
           
  0.670
BPG2
GTP binding protein; Required for brassinosteroid- (BR) mediated post- transcriptional and translational regulation in the chloroplast, including accumulation of chloroplast rRNA (PubMed-19919572). Involved in chloroplast differentiation (PubMed-19919572, PubMed-22526496) (660 aa)
     
   
  0.652
AT3G10550
Myotubularin 1; Phosphatase with phosphoinositide 3’-phosphatase activity that can use phosphatidylinositol-3-phosphate (PtdIns3P) and phosphatidylinositol-3,5-diphosphate (PtdIns3,5P(2)) as substrates and produces phosphatidylinositol-5-phosphate (PtdIns5P); participates in pathway(s) that transfer gene regulatory signals to the nucleus. Required for recovery after water deprivation, via the accumulation of PtdIns5P upon dehydration; high PtdIns5P levels mediate ATX1 cytoplasmic localization, thus down-regulating the expression of ATX1- dependent genes. Confers sensitivity to soil-wat [...] (840 aa)
           
  0.631
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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