STRINGSTRING
AT1G15620 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15620" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15620Uncharacterized protein (245 aa)    
Predicted Functional Partners:
AT5G52700
Copper transport family protein (370 aa)
     
        0.438
AT4G19750
Glycosyl hydrolase family protein with chitinase insertion domain (362 aa)
     
        0.438
AT3G45720
Major facilitator protein; Transporter involved in a passive nitrate efflux (555 aa)
     
        0.438
AT1G15610
Uncharacterized protein (243 aa)
     
     
0.438
AT4G19760
Glycosyl hydrolase family protein with chitinase insertion domain (369 aa)
     
        0.437
AT5G50140
Ankyrin repeat family protein (535 aa)
     
        0.436
HO4
Heme oxygenase 4; Catalyzes the opening of the heme ring to form the open- chain tetrapyrrole biliverdin IX with the release of iron and carbon monoxide (CO). Produces specifically the biliverdin IX- alpha isomer. Plays a minor role in phytochrome assembly and photomorphogenesis (283 aa)
     
        0.435
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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