• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G15640 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15640" - Unknown protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15640Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G15620.1); Has 154 Blast hits to 146 proteins in 13 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (255 aa)    
Predicted Functional Partners:
AT4G30830
Protein of unknown function, DUF593; Contains the following InterPro domains- Protein of unknown function DUF593 (InterPro-IPR007656); BEST Arabidopsis thaliana protein match is- Protein of unknown function, DUF593 (TAIR-AT2G24140.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (363 aa)
           
  0.766
AT4G27660
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species- Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source- NCBI BLink) (182 aa)
           
  0.766
AT4G00390
DNA-binding storekeeper protein-related transcriptional regulator; Its function is described as transcription regulator activity; Located in nucleolus; Expressed in seed; Expressed during E expanded cotyledon stage; Contains the following InterPro domains- Protein of unknown function DUF573 (InterPro-IPR007592); BEST Arabidopsis thaliana protein match is- DNA-binding storekeeper protein-related transcriptional regulator (TAIR-AT1G61730.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryot [...] (364 aa)
           
  0.766
AT3G54530
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G54520.1); Has 159 Blast hits to 159 proteins in 50 species- Archae - 2; Bacteria - 26; Metazoa - 55; Fungi - 5; Plants - 20; Viruses - 2; Other Eukaryotes - 49 (source- NCBI BLink) (332 aa)
           
  0.766
AT3G54520
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G54530.1); Has 72 Blast hits to 70 proteins in 20 species- Archae - 0; Bacteria - 5; Metazoa - 8; Fungi - 2; Plants - 18; Viruses - 0; Other Eukaryotes - 39 (source- NCBI BLink) (299 aa)
           
  0.766
AT3G02125
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Expressed in pollen tube; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G39200.1); Has 2247 Blast hits to 1434 proteins in 202 species- Archae - 4; Bacteria - 111; Metazoa - 942; Fungi - 239; Plants - 140; Viruses - 37; Other Eukaryotes - 774 (source- NCBI BLink) (355 aa)
           
  0.766
AT3G01015
TPX2 (targeting protein for Xklp2) protein family; Contains the following InterPro domains- Xklp2 targeting protein (InterPro-IPR009675); BEST Arabidopsis thaliana protein match is- TPX2 (targeting protein for Xklp2) protein family (TAIR-AT5G15510.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (488 aa)
           
  0.766
AT2G38823
Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT3G54520.1); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (258 aa)
           
  0.766
AT2G36550
Haloacid dehalogenase-like hydrolase family protein; Contains the following InterPro domains- NLI interacting factor (InterPro-IPR004274); BEST Arabidopsis thaliana protein match is- Haloacid dehalogenase-like hydrolase (HAD) superfamily protein (TAIR-AT2G36540.1); Has 91 Blast hits to 91 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 2; Other Eukaryotes - 2 (source- NCBI BLink) (141 aa)
           
  0.766
AT2G36540
Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Contains the following InterPro domains- NLI interacting factor (InterPro-IPR004274); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G36550.1); Has 198 Blast hits to 198 proteins in 57 species- Archae - 0; Bacteria - 12; Metazoa - 2; Fungi - 47; Plants - 115; Viruses - 4; Other Eukaryotes - 18 (source- NCBI BLink) (249 aa)
           
  0.766
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (8%) [HD]