STRINGSTRING
AT1G15680 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15680" - F-box family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15680F-box family protein (410 aa)    
Predicted Functional Partners:
AT1G43720
Uncharacterized protein (314 aa)
     
   
  0.963
AT5G18160
F-box protein (379 aa)
           
  0.963
AT1G20790
F-box protein (435 aa)
           
  0.963
LCR46
Putative defensin-like protein 83 (91 aa)
           
  0.960
AT4G22390
F-box protein (402 aa)
           
  0.960
AT1G09320
Agenet domain-containing protein (517 aa)
           
  0.910
PDF2.5
Defensin-like protein 6; Confers broad-spectrum resistance to pathogens (73 aa)
           
  0.733
VAMP728
Member of VAMP72 Gene Family (124 aa)
           
  0.599
CPR1
F-box protein CPR30; Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins (By similarity). Regulates negatively both salicylic acid (SA)-dependent and SA- independent defense signaling (413 aa)
           
  0.420
AT3G29800
AAA-type ATPase family protein (440 aa)
     
        0.411
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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