STRINGSTRING
TRFL5 protein (Arabidopsis thaliana) - STRING interaction network
"TRFL5" - TRF-like 5 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRFL5TRF-like 5 (390 aa)    
Predicted Functional Partners:
TRFL2
TRF-like 2; Binds specifically to the plant telomeric double- stranded DNA sequences. At least 6 repeats of telomeric sequences are required for binding (630 aa)
           
  0.861
TRFL3
TRF-like 3 (624 aa)
           
  0.841
TRFL4
TRF-like 4 (354 aa)
           
  0.809
TRFL1
TRF-like 1; Binds specifically to the plant telomeric double- stranded DNA sequences. At least 2 repeats of telomeric sequences are required for binding. Induces DNA bending (553 aa)
       
 
  0.756
TRFL9
TRF-like 9; Binds specifically to the plant telomeric double- stranded DNA sequences. At least 2 repeats of telomeric sequences are required for binding. Induces DNA bending (619 aa)
           
  0.738
AT1G53345
Uncharacterized protein (325 aa)
     
   
  0.652
AT1G15730
Cobalamin biosynthesis CobW-like protein (448 aa)
           
  0.646
AT1G14680
Uncharacterized protein (290 aa)
     
   
  0.645
AT1G69090
Uncharacterized protein (401 aa)
           
  0.640
AT1G18310
Glycosyl hydrolase family 81 protein (649 aa)
           
  0.640
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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