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AT1G15740 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15740" - Leucine-rich repeat family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15740Leucine-rich repeat family protein (585 aa)    
Predicted Functional Partners:
AT1G80520
Sterile alpha motif (SAM) domain-containing protein (192 aa)
           
  0.910
AT1G80510
Transmembrane amino acid transporter-like protein (489 aa)
           
  0.910
AT1G15760
Sterile alpha motif (SAM) domain-containing protein (202 aa)
           
  0.910
AT1G80530
Nodulin family protein (561 aa)
           
  0.880
AT1G15757
Putative defensin-like protein 110 (83 aa)
           
  0.864
AT4G19860
Lecithine-cholesterol acyltransferase-like 4 (535 aa)
     
        0.839
AT5G63190
MA3 domain-containing protein (702 aa)
     
        0.800
AT1G19660
Wound-responsive family protein; Bifunctional nuclease with both RNase and DNase activities. Involved in basal defense response. Participates in abscisic acid-derived callose deposition following infection by a necrotrophic pathogen (By similarity) (329 aa)
     
        0.795
HGO
Homogentisate 1,2-dioxygenase (461 aa)
     
        0.772
ATG8F
Autophagy 8f; Ubiquitin-like modifier involved in cytoplasm to vacuole transport (Cvt) vesicles and autophagosomes formation. May mediate the delivery of the vesicles and autophagosomes to the vacuole via the microtubule cytoskeleton (By similarity) (121 aa)
     
        0.740
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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