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AT1G15810 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15810" - S15/NS1, RNA-binding protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15810S15/NS1, RNA-binding protein (419 aa)    
Predicted Functional Partners:
AT2G31610
40S ribosomal protein S3-1 (250 aa)
   
  0.999
AT5G35530
40S ribosomal protein S3-3 (248 aa)
   
  0.999
AT3G53870
40S ribosomal protein S3-2 (249 aa)
   
  0.999
AtMg00090
Ribosomal protein S3 (556 aa)
   
  0.999
AtCg00800
RESISTANCE TO PSEUDOMONAS SYRINGAE 3 (218 aa)
   
  0.999
AT1G64880
Ribosomal protein S5 family protein (515 aa)
   
  0.998
AT3G49080
Small subunit ribosomal protein S9 (430 aa)
   
  0.998
rps2
Ribosomal protein S2 (236 aa)
   
  0.998
At3g03600
Ribosomal protein S2 (219 aa)
   
  0.998
At5g47320
Ribosomal protein S19; The RNA-binding domain found in RPS19 may functionally replaces the missing mitochondrial RPS13 (212 aa)
   
  0.998
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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