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AT1G15825 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15825" - Hydroxyproline-rich glycoprotein family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15825Hydroxyproline-rich glycoprotein family protein (126 aa)    
Predicted Functional Partners:
AT1G15830
Uncharacterized protein (483 aa)
     
   
  0.811
AT4G35610
Zinc finger (C2H2 type) family protein (271 aa)
           
  0.679
CRK15
Cysteine-rich receptor-like protein kinase 15 (507 aa)
           
  0.679
AT4G05553
Zinc knuckle (CCHC-type) family protein (111 aa)
           
  0.679
AT3G19620
Putative beta-D-xylosidase 5 (781 aa)
           
  0.679
AT2G43865
Uncharacterized protein (101 aa)
           
  0.679
AT1G54215
Proline-rich family protein (169 aa)
           
  0.679
AT1G07970
Uncharacterized protein (693 aa)
           
  0.671
AT4G13000
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein (372 aa)
           
  0.670
chr31
Chromatin remodeling 31; Probable chromatin remodeling factor (1410 aa)
           
  0.638
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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