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AT1G15850 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15850" - WD40 domain-containing protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15850WD40 domain-containing protein (140 aa)    
Predicted Functional Partners:
AT1G24310
Uncharacterized protein (377 aa)
     
 
  0.966
AT1G10390
Nucleoporin autopeptidase (1041 aa)
     
  0.958
AT4G27720
Major facilitator protein (460 aa)
           
  0.958
AT1G59660
Nucleoporin autopeptidase (997 aa)
     
  0.956
AT3G57350
Nucleoporin interacting component (Nup93/Nic96-like) family protein (860 aa)
     
 
  0.955
AT2G41620
Nup93/Nic96 nucleoporin interacting component-containing protein (861 aa)
     
 
  0.955
AT1G24130
WD40 domain-containing protein (415 aa)
   
     
  0.905
AT1G67120
AAA ATPase containing von Willebrand factor type A domain-containing protein; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits (5393 aa)
       
 
  0.850
AT5G66240
transducin/WD40 domain-containing protein (331 aa)
   
      0.832
AT5G14530
transducin/WD40 domain-containing protein (330 aa)
   
      0.830
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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