STRINGSTRING
AT1G15885 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G15885" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G15885Uncharacterized protein (88 aa)    
Predicted Functional Partners:
AT1G16916
Uncharacterized protein (65 aa)
     
        0.437
HVA22K
HVA22-like protein K (200 aa)
     
        0.435
AT3G14452
Uncharacterized protein (38 aa)
     
        0.435
PSRP6
Plastid-specific 50S ribosomal protein 6 (106 aa)
     
        0.434
AT1G73120
Uncharacterized protein (109 aa)
     
        0.431
AT2G43745
Uncharacterized protein (90 aa)
     
        0.430
AT5G24570
Uncharacterized protein (70 aa)
     
        0.426
ICL
Isocitrate lyase; Involved in storage lipid mobilization during the growth of higher plant seedling (576 aa)
     
        0.426
emb2184
Embryo defective 2184; Binds the 23S rRNA (144 aa)
     
        0.426
AT1G01170
Uncharacterized protein (83 aa)
     
        0.426
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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