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STRINGSTRING
AT1G16000 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16000" - Uncharacterized protein At1g16000/T24D18_10 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
AT1G16000Uncharacterized protein At1g16000/T24D18_10; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G80890.1); Has 41 Blast hits to 40 proteins in 10 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (86 aa)    
Predicted Functional Partners:
AT5G19540
Uncharacterized protein At5g19540; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (462 aa)
           
  0.967
AT2G14860
Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein; Involved in biological_process unknown; Located in integral to membrane, peroxisomal membrane; Expressed in 21 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Mpv17/PMP22 (InterPro-IPR007248); BEST Arabidopsis thaliana protein match is- Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein (TAIR-AT4G33905.1); Has 1452 Blast hits to 1452 proteins in 203 species- Archae - 0; Bacteria - 0; Metazoa - 577; Fungi - 386; Plants - 314; Viruses - 11; Other Eukaryotes - 164 (source- NCBI BLink) (252 aa)
     
   
  0.833
AKR2
Ankyrin repeat domain-containing protein 2A; Exhibits chaperone activity toward chloroplast outer envelope membrane, mitochondrion outer membrane, endoplasmic reticulum membrane and peroxisomal proteins, by recruiting specific proteins containing a single transmembrane associated with an AKR2A-binding sequence (ABS) and subsequently binding glycolipids (e.g. monogalactosyldiacylglycerol (MGDG) and phosphatidylglycerol (PG)) present in the membrane of the target organelle. Seems to be involved in the regulation of hydrogen peroxide levels during biotic and abiotic stresses by optimizing [...] (350 aa)
       
 
  0.756
PMP22
22-kD peroxisomal membrane protein, an integral membrane protein embedded in the lipid bilayer (190 aa)
           
  0.612
AT1G77750
Small ribosomal subunit protein S13, mitochondrial; Located at the top of the head of the small subunit, it contacts several helices of the 18S rRNA (154 aa)
     
        0.601
TIM10
Encodes a small zinc finger-like protein that is a component of the mitochondrial protein import apparatus (107 aa)
     
        0.540
AT1G33590
Leucine-rich repeat (LRR) family protein; Involved in signal transduction, response to karrikin, defense response; Located in cell wall, chloroplast, plant-type cell wall; Expressed in 22 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Leucine-rich repeat, typical subtype (InterPro-IPR003591), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro-IPR013210), Leucine-rich repeat (InterPro-IPR001611); BEST Arabidopsis thaliana protein match is- Leucine-rich repeat (LRR) family protein (TAIR-AT1G33600.1); Has 74647 Blast hits to 2 [...] (477 aa)
           
  0.527
TOM6
Mitochondrial import receptor subunit TOM6 homolog; A component of the complex responsible for the recognition and translocation of cytosolically synthesized mitochondrial preproteins; Belongs to the Tom6 family (54 aa)
     
        0.499
TOC64-III
Translocon at the outer membrane of chloroplasts 64-III; Chaperone receptor mediating Hsp90-dependent protein targeting to chloroplasts. Bi-functional preprotein receptor acting on both sides of the membrane. Not essential for an efficient import of pre-proteins into plastids (589 aa)
           
  0.499
OEP7
Encodes a 7 kDa chloroplast outer envelope membrane protein (64 aa)
     
   
  0.478
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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