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AT1G16225 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16225" - Putative syntaxin-type t-SNARE protein in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Databases
Textmining
[Homology]
Score
AT1G16225Putative syntaxin-type t-SNARE protein (199 aa)    
Predicted Functional Partners:
AT5G39630
Vesicle transport v-SNARE family protein (207 aa)
     
  0.991
ATYKT62
VAMP-like protein YKT62; May be involved in the secretory pathway (199 aa)
     
  0.988
YKT61
VAMP-like protein YKT61 (221 aa)
     
  0.988
SGR4
SHOOT GRAVITROPSIM 4; May function as a v-SNARE responsible for targeting AtELP-containing vesicles from the trans-Golgi network (TGN) to the prevacuolar compartment (PVC). May be also involved in retrograde traffic to the cis-Golgi (By similarity). Promotes the formation of vacuolar membrane ’bulbs’. Required for amyloplast sedimentation in the endodermis during shoot gravitropism, which are thus acting as statoliths. Expression in the endodermis is essential for the shoot gravitropic response, whereas expression in other tissues may be responsible for the correct stem and leaf shape (221 aa)
     
  0.988
VTI13
Vesicle transport V-snare 13; May function as a v-SNARE responsible for targeting vesicles involved in the secretory pathway (195 aa)
     
  0.988
VTI1B
Vesicle transport v-SNARE 12; May function as a v-SNARE responsible for the docking or fusion of transport vesicles within the trans-Golgi network (TGN). May be also involved in retrograde traffic to the cis-Golgi (By similarity) (222 aa)
     
  0.988
VAM3
Syntaxin-22; May provide the t-SNARE function in the vacuolar assembly. Promotes the formation of vacuolar membrane ’bulbs’. Required for inflorescence stem gravitropism (268 aa)
     
  0.980
SYP21
Syntaxin-21; May function in the docking or fusion of transport vesicles with the prevacuolar membrane (279 aa)
     
  0.980
SYP23
Syntaxin-23; May function in the docking or fusion of transport vesicles with the prevacuolar membrane (262 aa)
     
  0.980
ATSYP24
Syntaxin 7; Vesicle trafficking protein that functions in the secretory pathway (416 aa)
     
  0.980
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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