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SYP51 protein (Arabidopsis thaliana) - STRING interaction network
"SYP51" - Syntaxin-51 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYP51Syntaxin-51; Vesicle trafficking protein that functions in the secretory pathway (232 aa)    
Predicted Functional Partners:
SGR4
SHOOT GRAVITROPSIM 4; May function as a v-SNARE responsible for targeting AtELP-containing vesicles from the trans-Golgi network (TGN) to the prevacuolar compartment (PVC). May be also involved in retrograde traffic to the cis-Golgi (By similarity). Promotes the formation of vacuolar membrane ’bulbs’. Required for amyloplast sedimentation in the endodermis during shoot gravitropism, which are thus acting as statoliths. Expression in the endodermis is essential for the shoot gravitropic response, whereas expression in other tissues may be responsible for the correct stem and leaf shape (221 aa)
     
  0.999
VTI1B
Vesicle transport v-SNARE 12; May function as a v-SNARE responsible for the docking or fusion of transport vesicles within the trans-Golgi network (TGN). May be also involved in retrograde traffic to the cis-Golgi (By similarity) (222 aa)
     
  0.998
VAM3
Syntaxin-22; May provide the t-SNARE function in the vacuolar assembly. Promotes the formation of vacuolar membrane ’bulbs’. Required for inflorescence stem gravitropism (268 aa)
     
  0.998
SYP21
Syntaxin-21; May function in the docking or fusion of transport vesicles with the prevacuolar membrane (279 aa)
     
  0.998
ATYKT62
VAMP-like protein YKT62; May be involved in the secretory pathway (199 aa)
     
  0.992
SYP41
Syntaxin-41; Vesicle trafficking protein that functions in the secretory pathway (322 aa)
     
  0.991
YKT61
VAMP-like protein YKT61 (221 aa)
     
  0.990
ASNAP2
Alpha-soluble NSF attachment protein 2; Required for vesicular transport between the endoplasmic reticulum and the Golgi apparatus. Binds to SNARE complex and then recruits NSF to disassemble it (By similarity) (289 aa)
     
  0.989
VTI13
Vesicle transport V-snare 13; May function as a v-SNARE responsible for targeting vesicles involved in the secretory pathway (195 aa)
     
  0.988
AT5G39630
Vesicle transport v-SNARE family protein (207 aa)
     
  0.988
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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