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RH36 protein (Arabidopsis thaliana) - STRING interaction network
"RH36" - RNA helicase 36 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RH36RNA helicase 36 (491 aa)    
Predicted Functional Partners:
PWP2
Periodic tryptophan protein 2 (900 aa)
     
  0.998
YAO
YAOZHE; Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA (By similarity). Essential for embryogenesis. Plays a critical role in embryo sac development and gametic cell fate. Required for the correct positioning of the first division plane of zygote. May function during early embryogenesis (PubMed-20699009) (504 aa)
     
 
  0.997
AT3G09720
DEAD-box ATP-dependent RNA helicase 57 (541 aa)
   
 
0.996
EMB2271
EMBRYO DEFECTIVE 2271; Component of a nucleolar small nuclear ribonucleoprotein particle (snoRNP) thought to participate in the processing and modification of pre-ribosomal RNA (By similarity). Essential for embryogenesis (By similarity). May function during late embryogenesis (PubMed-20699009) (479 aa)
     
 
  0.996
AT5G14050
Transducin/WD40 repeat-like superfamily protein; Involved in nucleolar processing of pre-18S ribosomal RNA (546 aa)
     
 
  0.996
NOF1
Nucleolar factor 1 (754 aa)
     
 
  0.996
SWA1
SLOW WALKER1; Essential protein required for nuclear division and organization during embryo sac development in female gametophyte, probably by promoting rRNA biogenesis essential for the progression of the mitotic division cycles during gametogenesis (PubMed-15634699, PubMed-15980260). Involved in nucleolar processing of pre-18S ribosomal RNA (PubMed-15980260) (530 aa)
     
 
  0.996
AT5G60990
DEAD-box ATP-dependent RNA helicase 10 (456 aa)
   
 
0.995
AT5G11240
transducin/WD40 domain-containing protein (615 aa)
     
 
    0.995
TOZ
TORMOZEMBRYO DEFECTIVE (876 aa)
     
 
  0.995
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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