STRINGSTRING
AT1G16310 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16310" - Cation efflux family protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G16310Cation efflux family protein; Involved in sequestration of excess metal in the cytoplasm into vacuoles to maintain metal homeostasis (428 aa)    
Predicted Functional Partners:
AT3G09405
Pectin lyase-like protein; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (409 aa)
           
  0.863
AT5G60750
CAAX amino terminal protease family protein (347 aa)
     
   
  0.841
MTPB1
Metal tolerance protein B; Involved in sequestration of excess zinc in the cytoplasm into vacuoles to maintain zinc homeostasis (375 aa)
   
   
  0.772
BPS2
BYPASS 2 (347 aa)
           
  0.734
AT3G62060
Pectinacetylesterase family protein; Hydrolyzes acetyl esters in homogalacturonan regions of pectin. In type I primary cell wall, galacturonic acid residues of pectin can be acetylated at the O-2 and O-3 positions. Decreasing the degree of acetylation of pectin gels in vitro alters their physical properties (419 aa)
           
  0.678
MLO3
MLO-like protein 3; May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)- dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity) (508 aa)
           
  0.670
FPS2
Farnesyl diphosphate synthase 2; Catalyzes the sequential condensation of isopentenyl pyrophosphate with the allylic pyrophosphates, dimethylallyl pyrophosphate, and then with the resultant geranylpyrophosphate to the ultimate product farnesyl pyrophosphate (342 aa)
         
  0.639
HCC1
Homologue of the copper chaperone SCO1; Thought to play a role in cellular copper homeostasis, mitochondrial redox signaling or insertion of copper into the active site of COX. Plays an essential role in embryo development (334 aa)
           
  0.637
MLO4
MLO-like protein 4; May be involved in modulation of pathogen defense and leaf cell death. Activity seems to be regulated by Ca(2+)- dependent calmodulin binding and seems not to require heterotrimeric G proteins (By similarity) (573 aa)
           
  0.633
AAE1
Acyl activating enzyme 1; May act as an acid--thiol ligase that activates carboxylic acids by forming acyl-CoAs (556 aa)
   
   
  0.630
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (18%) [HD]