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RHS3 protein (Arabidopsis thaliana) - STRING interaction network
"RHS3" - Root hair specific 3 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RHS3Root hair specific 3; Involved in root hair growth and morphogenesis (499 aa)    
Predicted Functional Partners:
AT2G41970
Putative protein kinase (365 aa)
     
   
  0.907
PERK13
Protein root hair specific 10; Regulates negatively root hairs elongation (710 aa)
     
   
  0.841
AT5G61550
U-box domain-containing protein 52; Functions as an E3 ubiquitin ligase (860 aa)
     
   
  0.787
AT4G31250
Leucine-rich repeat protein kinase family protein (676 aa)
     
   
  0.742
RHS16
Root hair specific 16 (913 aa)
     
   
  0.739
RHS6
Root hair specific 6 (880 aa)
     
   
  0.700
AT3G48940
Remorin-like protein (175 aa)
     
   
  0.686
RHS12
Pectinesterase 24; Acts in the modification of cell walls via demethylesterification of cell wall pectin (561 aa)
     
   
  0.670
ROH1
Protein ROH1 (415 aa)
           
  0.670
ROPGEF2
Rop guanine nucleotide exchange factor 2; Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP (485 aa)
           
  0.638
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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