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STRINGSTRING
AT1G16515 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16515" - Unknown protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G16515Unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (34 aa)    
Predicted Functional Partners:
AT5G67490
Succinate dehydrogenase assembly factor; Unknown protein; Contains the following InterPro domains- Protein of unknown function DUF1674 (InterPro-IPR012875); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (108 aa)
           
  0.714
AT5G03460
Uncharacterized protein At5g03460; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in 24 plant structures; Expressed during 15 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (89 aa)
           
  0.714
RALFL32
Protein RALF-like 32; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity) (117 aa)
           
  0.714
AT4G05070
Uncharacterized protein At4g05070; Wound-responsive family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in chloroplast; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein of unknown function wound-induced (InterPro-IPR022251); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (87 aa)
           
  0.714
RALFL24
Protein RALF-like 24; Cell signaling peptide that may regulate plant stress, growth, and development. Mediates a rapid alkalinization of extracellular space by mediating a transient increase in the cytoplasmic Ca(2+) concentration leading to a calcium-dependent signaling events through a cell surface receptor and a concomitant activation of some intracellular mitogen-activated protein kinases (By similarity) (118 aa)
           
  0.714
AT3G13845
Uncharacterized protein At3g13845/MCP4.7; Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in 24 plant structures; Expressed during 15 growth stages; Has 22 Blast hits to 22 proteins in 10 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (70 aa)
           
  0.714
AT2G32210
Cysteine-rich/transmembrane domain A-like protein; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT2G32190.1); Has 214 Blast hits to 214 proteins in 21 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 10; Plants - 203; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (71 aa)
           
  0.714
AT1G67865
At1g67862/At1g67862; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G67860.1); Has 13 Blast hits to 13 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (75 aa)
           
  0.714
AT1G67860
Uncharacterized protein T23K23.29; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G67865.1); Has 13 Blast hits to 13 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (78 aa)
           
  0.714
AT1G65490
Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in 22 plant structures; Expressed during 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G65486.1); Has 23 Blast hits to 23 proteins in 2 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (88 aa)
           
  0.714
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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