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AT1G16640 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16640" - AP2/B3-like transcriptional factor family protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G16640AP2/B3-like transcriptional factor family protein (134 aa)    
Predicted Functional Partners:
AT4G31640
B3 domain-containing protein REM5 (352 aa)
           
  0.739
AT2G24680
B3 domain-containing protein REM12 (471 aa)
           
  0.739
AT1G20600
AP2/B3 domain-containing protein (237 aa)
           
  0.739
AT2G24645
Transcriptional factor B3 family protein (490 aa)
           
  0.670
AT2G16990
Major facilitator protein (456 aa)
           
  0.633
RTV1
Related to vernalization1 1; Involved in the regulation of vernalization (By similarity). Binds to DNA in vitro in a non-sequence-specific manner. XLG2 promotes the DNA binding activity of RTV1 specifically to promoter regions of FT and SOC1 in vivo and thus leads to the activation of floral integrator genes (226 aa)
           
  0.631
AT1G52190
Putative peptide transporter; Low-affinity nitrate transporter involved in xylem-to- phloem transfer for redistributing nitrate into developing leaves. Not involved in dipeptides transport (607 aa)
           
  0.559
AT4G31620
B3 domain-containing protein REM3 (492 aa)
           
  0.558
GLIP5
GDSL-motif lipase 5 (385 aa)
           
  0.556
AT1G78280
Transferase (943 aa)
           
  0.554
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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