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AT1G16640 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16640" - AP2/B3-like transcriptional factor family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G16640AP2/B3-like transcriptional factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Expressed in 16 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- AP2/B3-like transcriptional factor family protein (TAIR-AT3G06220.1); Has 242 Blast hits to 231 proteins in 12 species- Archae - 0; Bacteria [...] (134 aa)    
Predicted Functional Partners:
AT4G31630
Putative B3 domain-containing protein REM4; Transcriptional factor B3 family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Expressed in egg cell; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G31615.1); Has 603 Blast hits to 448 proteins in 67 species- Archae - 0; Bacteria - 13; Metazoa - 36; [...] (512 aa)
           
  0.838
RAV1
AP2/ERF and B3 domain-containing transcription factor RAV1; Encodes an AP2/B3 domain transcription factor which is upregulated in response to low temperature. It contains a B3 DNA binding domain. It has circadian regulation and may function as a negative growth regulator; Belongs to the AP2/ERF transcription factor family. RAV subfamily (344 aa)
           
  0.836
AT4G31640
Transcriptional factor B3 family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G31650.1); Has 686 Blast hits to 452 proteins in 17 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 686; Viruses - 0; Other Eukaryotes - 0 (source- N [...] (352 aa)
           
  0.769
AT2G24645
Transcriptional factor B3 family protein; Its function is described as DNA binding; Involved in regulation of transcription, DNA-dependent; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G00260.1) (490 aa)
           
  0.740
AT4G31620
Transcriptional factor B3 family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in cellular_component unknown; Contains the following InterPro domains- Transcriptional factor B3 (InterPro-IPR003340); BEST Arabidopsis thaliana protein match is- Transcriptional factor B3 family protein (TAIR-AT4G31615.1); Has 320 Blast hits to 174 proteins in 11 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 320; Viruses - 0; Other Eukaryotes - 0 (source- N [...] (492 aa)
           
  0.731
VRN1
AP2/B3-like transcriptional factor family protein; Involved in the regulation of vernalization. Acts as transcriptional repressor of FLC, a major target of the vernalization pathway. Binds DNA in vitro in a non-sequence- specific manner (341 aa)
           
  0.664
RHS3
Serine/threonine-protein kinase RHS3; Involved in root hair growth and morphogenesis; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family (499 aa)
           
  0.663
AT2G16990
Major facilitator superfamily protein; Its function is described as tetracycline transporter activity; Involved in transmembrane transport; Located in endomembrane system; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Major facilitator superfamily MFS-1 (InterPro-IPR011701), Major facilitator superfamily, general substrate transporter (InterPro-IPR016196); BEST Arabidopsis thaliana protein match is- Major facilitator superfamily protein (TAIR-AT2G16980.2); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 79 [...] (456 aa)
           
  0.636
AT1G78280
Transferases, transferring glycosyl groups; Contains the following InterPro domains- Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro-IPR003347), F-box domain, cyclin-like (InterPro-IPR001810), F-box domain, Skp2-like (InterPro-IPR022364), Transcription factor jumonji (InterPro-IPR013129), Aminoglycoside phosphotransferase (InterPro-IPR002575), Protein kinase-like domain (InterPro-IPR011009); BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G06550.1); Has 1510 Blast hits to 1497 proteins in 307 species- Archae - 0; Bacteria - 312; Metazoa - 658; Fung [...] (943 aa)
           
  0.625
At1g59750
Encodes a member of the auxin response factor family. ARFs bind to the cis element 5’-TGTCTC-3’ ARFs mediate changes in gene expression in response to auxin. ARF’s form heterodimers with IAA/AUX genes. ARF1 enhances mutant phenotypes of ARF2 and may act with ARF2 to control aspects of maturation and senescence.ARF1-LUC and 3xHA-ARF1 proteins have a half-life of ~3-4 hours and their degradation is reduced by proteasome inhibitors. 3xHA-ARF1 degradation is not affected by a pre-treatment with IAA. A nuclear-targeted fusion protein containing the middle region of ARF1 linked to LUC-NLS ha [...] (665 aa)
           
  0.625
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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