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AT1G16680 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16680" - Chaperone DnaJ-domain superfamily protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G16680Chaperone DnaJ-domain superfamily protein; Its function is described as unfolded protein binding, heat shock protein binding; Involved in protein folding; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro-IPR015609), Heat shock protein DnaJ, N-terminal (InterPro-IPR001623), Heat shock protein DnaJ (InterPro-IPR003095), Heat shock protein DnaJ, conserved site (InterPro-IPR018253); BEST Arabidopsis thaliana protein match is- Cha [...] (554 aa)    
Predicted Functional Partners:
HBT
Cell division cycle protein 27 homolog B; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of e [...] (744 aa)
     
        0.792
CDC27a
Tetratricopeptide repeat (TPR)-like superfamily protein; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in t [...] (717 aa)
     
        0.779
THO5B
THO complex, subunit 5; Encodes a component of the putative Arabidopsis THO/TREX complex- THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis; Belongs to the THOC5 family (819 aa)
     
 
  0.582
THO5A
THO complex, subunit 5; Encodes a component of the putative Arabidopsis THO/TREX complex- THO1 or HPR1 (At5g09860), THO2 (At1g24706), THO3 or TEX1 (At5g56130), THO5 (At5g42920, At1g45233), THO6 (At2g19430), and THO7 (At5g16790, At3g02950). THO/TREX complexes in animals have been implicated in the transport of mRNA precursors. Mutants of THO3/TEX1, THO1, THO6 accumulate reduced amount of small interfering (si)RNA, suggesting a role of the putative Arabidopsis THO/TREX in siRNA biosynthesis (452 aa)
     
 
  0.582
AT1G43860
Sequence-specific DNA binding transcription factors; Contains the following InterPro domains- Ribosome maturation protein SBDS, C-terminal (InterPro-IPR018978), Ribosome maturation protein SBDS (InterPro-IPR002140), Ribosome maturation protein SBDS, N-terminal (InterPro-IPR019783), Ribosome maturation protein SBDS, conserved site (InterPro-IPR018023); Has 1053 Blast hits to 1042 proteins in 349 species- Archae - 219; Bacteria - 2; Metazoa - 264; Fungi - 287; Plants - 65; Viruses - 0; Other Eukaryotes - 216 (source- NCBI BLink) (370 aa)
       
      0.582
AT2G36130
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity) (164 aa)
       
 
  0.581
AT2G38730
Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (By similarity) (199 aa)
     
 
  0.568
UAP56b
DEAD/DEAH box RNA helicase family protein ; Its function is described as helicase activity, nucleic acid binding, ATP binding, ATP-dependent helicase activity; Involved in biological_process unknown; Expressed in male gametophyte, guard cell, pollen tube; Expressed during M germinated pollen stage; Contains the following InterPro domains- DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro-IPR011545), RNA helicase, DEAD-box type, Q motif (InterPro-IPR014014), DEAD-like helicase, N-terminal (InterPro-IPR014001), DNA/RNA helicase, C-terminal (InterPro-IPR001650), Helicase, superfa [...] (486 aa)
     
 
  0.526
UAP56a
DEAD/DEAH box RNA helicase family protein; ATP-dependent RNA helicase involved in pre-mRNA splicing. Required for the export of mRNA out of the nucleus. In addition to ssRNA and dsRNA, binds dsDNA, but not ssDNA; Belongs to the DEAD box helicase family. DECD subfamily (427 aa)
     
 
  0.526
AGL20
MADS-box protein SOC1; Controls flowering and is required for CO to promote flowering. It acts downstream of FT. Overexpression of (SOC1) AGL20 suppresses not only the late flowering of plants that have functional FRI and FLC alleles but also the delayed phase transitions during the vegetative stages of development. AGL20/SOC1 acts with AGL24 to promote flowering and inflorescence meristem identity.AGL20 upregulates expression of AGL24 in response to GA (214 aa)
           
  0.523
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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