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AT1G16680 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16680" - Puttaive S-locus protein 5 in Arabidopsis thaliana
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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Textmining
[Homology]
Score
AT1G16680Puttaive S-locus protein 5 (554 aa)    
Predicted Functional Partners:
emb1220
Embryo defective 1220 (485 aa)
     
   
  0.470
PKL
PICKLE; Chromatin remodeling factor that represses the expression of embryonic trait genes (such as NFYB9/LEC1) upon and after seed germination and thus enables the developmental switch to post-germinative growth. Silences some MADS-box proteins such as PHE1 and PHE2. Plays a role during carpel differentiation. Regulates late processes in cytokinin signaling (1384 aa)
     
        0.441
AT2G16880
Pentatricopeptide repeat-containing protein (743 aa)
     
        0.436
emb1427
Embryo defective 1427; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (995 aa)
     
        0.436
SCO3
SNOWY COTYLEDON 3; Probable microtubule-associated peroxisomal protein required for chloroplast biogenesis and for the formation of the prolamellar body and prothylakoids in etioplasts. Not involved in peroxisomal metabolism, including mobilization of storage compounds during germination, fatty acid beta-oxydation or photorespiration (644 aa)
     
        0.435
SYN4
Cohesin complex subunit SCC1; Involved in sister chromatid and centromere cohesion during mitosis (1031 aa)
     
        0.434
UBP15
Ubiquitin-specific protease 15; Recognizes and hydrolyzes the peptide bond at the C- terminal Gly of ubiquitin. Involved in the processing of poly- ubiquitin precursors as well as that of ubiquitinated proteins (By similarity) (928 aa)
     
        0.427
HBT
HOBBIT; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle. The APC/C complex controls several key steps in the cell cycle by mediating ubiquitination and subsequent degradation of target proteins such as cyclins. The APC/C complex is required for the female gametophyte development and is involved in several aspect of development by controlling cell division and cell elongation. Involved in the control of endoreduplication. Functionally red [...] (744 aa)
     
        0.425
AT4G13970
Zinc ion binding (778 aa)
     
        0.424
AT2G01440
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair (973 aa)
     
   
  0.421
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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