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AT1G16705 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16705" - p300/CBP acetyltransferase-related protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G16705p300/CBP acetyltransferase-related protein (129 aa)    
Predicted Functional Partners:
AT1G67360
Rubber elongation factor protein (REF) (240 aa)
           
  0.960
HAC4
Histone acetyltransferase of the CBP family 4; Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation (1456 aa)
           
  0.911
HAC2
E1A/CREB-binding protein; Acetyltransferase enzyme. Acetylates histones, giving a specific tag for transcriptional activation (By similarity). No acetyltransferase activity found in vitro (1367 aa)
     
   
  0.875
TOPII
Topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1473 aa)
     
  0.815
BSH
BUSHY GROWTH; Component of a multiprotein complex equivalent of the yeast SWI/SNF complex, an ATP-dependent chromatin-remodeling complex, which is required for the positive and negative regulation of gene expression of a large number of genes. It changes chromatin structure by altering DNA-histone contacts within a nucleosome, leading eventually to a change in nucleosome position, thus facilitating or repressing binding of gene-specific transcription factors (242 aa)
     
  0.801
SDG29
SET domain group 29; Histone methyltransferase (1043 aa)
     
 
  0.759
SDG16
SET domain protein 16; Histone methyltransferase (1027 aa)
     
 
  0.759
SDG14
SET domain protein 14; Histone methyltransferase (1018 aa)
     
 
  0.759
SET27
Homologue of trithorax; Histone methyltransferase. Methylates ’Lys-4’ of histone H3. H3 ’Lys-4’ methylation represents a specific tag for epigenetic transcriptional activation. Required to maintain the active state of class A (AP1 and AP2), class B (PI and AP3) and class C (AG) floral homeotic genes at early stages of flower development. Regulates floral organ identity and flowering transition. Functions as a receptor for the lipid messenger phosphatidylinositol 5-phosphate (PI5P), which regulates negatively its transcriptional activation activity (1062 aa)
     
 
  0.759
ATX2
Trithorax-like protein 2; Histone methyltransferase (1083 aa)
     
 
  0.759
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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