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AT1G16850 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16850" - Uncharacterized protein At1g16850 in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G16850Uncharacterized protein At1g16850; Unknown protein; Its function is described as molecular_function unknown; Involved in response to salt stress; Located in endomembrane system; Expressed in leaf apex, leaf whorl, male gametophyte, flower, leaf; Expressed during LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Pl [...] (152 aa)    
Predicted Functional Partners:
AT4G39675
At4g39675; Unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (70 aa)
           
  0.930
AT1G11210
Cotton fiber protein, putative (DUF761); Protein of unknown function (DUF761); Its function is described as molecular_function unknown; Involved in response to oxidative stress; Located in endomembrane system; Expressed in 10 plant structures; Expressed during LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Protein of unknown function DUF761, plant (InterPro-IPR008480); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF761) (TAIR-AT1G11220.1); Has 74 Blast hits [...] (308 aa)
     
   
  0.909
AT5G49700
Predicted AT-hook DNA-binding family protein; Transcription factor that specifically binds AT-rich DNA sequences related to the nuclear matrix attachment regions (MARs) (276 aa)
           
  0.863
AT2G44380
Cysteine/Histidine-rich C1 domain family protein; Contains the following InterPro domains- DC1 (InterPro-IPR004146), C1-like (InterPro-IPR011424); BEST Arabidopsis thaliana protein match is- Cysteine/Histidine-rich C1 domain family protein (TAIR-AT5G43520.1); Has 1997 Blast hits to 742 proteins in 26 species- Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 1986; Viruses - 0; Other Eukaryotes - 6 (source- NCBI BLink) (247 aa)
           
  0.832
USPL1
Unknown seed protein like 1; Encodes USPL1, a BURP domain protein targeted to the protein storage vacuoles. Overexpression of USPL1 affects seed development, protein storage vacuoles and lipid vesicles morphology and function (280 aa)
           
  0.770
LEA14
Probable desiccation-related protein LEA14; Encodes late-embryogenesis abundant protein whose mRNA levels are induced in response to wounding and light stress. Might be involved in protection against dessication; Belongs to the LEA type 2 family (151 aa)
     
   
  0.718
LTI30
Belongs to the dehydrin protein family, which contains highly conserved stretches of 7-17 residues that are repetitively scattered in their sequences, the K-, S-, Y- and lysine rich segments. LTI29 and LTI30 double overexpressors confer freeze tolerance. Located in membranes. mRNA upregulated by water deprivation and abscisic acid (193 aa)
     
   
  0.713
AT1G78410
VQ motif-containing protein 10; May modulate WRKY transcription factor activities (108 aa)
           
  0.700
LTI78
Low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A); Cold regulated gene, the 5’ region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expression; Belongs to the LTI78/LTI65 family (710 aa)
     
   
  0.684
KIN2
Stress-induced protein KIN2; Encodes a gene that can be induced by cold and abscisic acid and may be involved in cold acclimation and salt tolerance (66 aa)
     
   
  0.657
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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