STRINGSTRING
AT1G16850 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G16850" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G16850Uncharacterized protein (152 aa)    
Predicted Functional Partners:
LTI78
LOW-TEMPERATURE-INDUCED 78 (710 aa)
     
   
  0.743
AT1G11210
Uncharacterized protein (308 aa)
     
   
  0.738
LTI30
Dehydrin Xero 2 (193 aa)
     
   
  0.682
LEA14
LATE EMBRYOGENESIS ABUNDANT 14 (151 aa)
     
   
  0.657
AT1G69160
Uncharacterized protein; Involved in auxin transport. Regulator of the auxin signaling pathway (321 aa)
           
  0.606
AT1G11880
Phosphatidylinositol glycan, class V (489 aa)
           
  0.605
COR15A
Cold-regulated 15a; Exhibits cryoprotective activity toward stromal substrates (e.g. LDH and rubisco) in chloroplasts and in protoplasts and confers freezing tolerance to plants in a CBF- dependent manner (PubMed-1567390, PubMed-11038526, PubMed-9826741, PubMed-17384167, PubMed-18540080, PubMed-19563440). Protectant against various stresses (e.g. cold, drought and heat stress) by preventing protein aggregation (e.g. LDH) and attenuating enzyme inactivation (PubMed-18540080). Influences the intrinsic curvature of the inner membrane of the chloroplast envelope, and modulates the freeze-i [...] (139 aa)
     
   
  0.566
AT4G39675
Uncharacterized protein (70 aa)
           
  0.559
AT4G17410
DWNN domain-containing protein (827 aa)
           
  0.551
COR15B
Cold regulated 15b; Exhibits cryoprotective activity toward stromal substrates in chloroplasts and in protoplasts and confers freezing tolerance to plants in a CBF-dependent manner. Protectant against various stresses (e.g. cold, drought and heat stress) by preventing protein aggregation and attenuating enzyme inactivation. Influences the intrinsic curvature of the inner membrane of the chloroplast envelope, and modulates the freeze- induced lamellar-to-hexagonal II phase transitions that occur in regions where the plasma membrane is brought into close apposition with the chloroplast e [...] (141 aa)
     
   
  0.530
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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