STRINGSTRING
SRG1 protein (Arabidopsis thaliana) - STRING interaction network
"SRG1" - Protein SRG1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRG1Protein SRG1 (358 aa)    
Predicted Functional Partners:
AT5G35930
AMP-dependent synthetase and ligase family protein (1040 aa)
         
  0.524
AT5G54940
Translation initiation factor SUI1 family protein (112 aa)
              0.454
AT5G54760
Translation initiation factor SUI1 family protein (113 aa)
              0.454
AT5G11900
Translation initiation factor SUI1 family protein (198 aa)
              0.454
AT4G27130
Protein translation factor SUI1-1; Probably involved in translation (113 aa)
              0.454
AT1G54290
Protein translation factor SUI1-2; Probably involved in translation (113 aa)
              0.454
GSTU4
Glutathione S-transferase; May be involved in the conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles and have a detoxification role against certain herbicides (224 aa)
     
   
  0.433
AT1G09500
Rossmann-fold NAD(P)-binding domain-containing protein (325 aa)
     
   
  0.433
DIM1B
Adenosine dimethyl transferase 1B; N6-adenine methyltransferase which modifies the AA dinucleotide at the plant mitochondrial 18S rRNA nucleotides A1914 and A1915. Not active as mitochondrial transcription factor (380 aa)
           
  0.429
AT3G10200
Putative methyltransferase PMT6 (591 aa)
           
  0.422
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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