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STIPL1 protein (Arabidopsis thaliana) - STRING interaction network
"STIPL1" - SPLICEOSOMAL TIMEKEEPER LOCUS1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
STIPL1SPLICEOSOMAL TIMEKEEPER LOCUS1; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events (By similarity). Required for efficient splicing of genes that act within the plant circadian clock (849 aa)    
Predicted Functional Partners:
MAC3A
MOS4-associated complex 3A; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair (By similarity). Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity (523 aa)
     
 
  0.964
MAC3B
MOS4-associated complex 3B; Probable ubiquitin-protein ligase which is mainly involved pre-mRNA splicing and DNA repair (By similarity). Component of the MAC complex that probably regulates defense responses through transcriptional control and thereby is essential for plant innate immunity (525 aa)
     
 
  0.963
AT4G21110
G10 family protein (145 aa)
       
 
  0.933
AT1G10580
pre-mRNA-processing factor 17 (573 aa)
     
 
  0.924
ATO
ATROPOS (504 aa)
     
 
  0.912
U2A
U2 small nuclear ribonucleoprotein A; This protein is associated with sn-RNP U2. It helps the A’ protein to bind stem loop IV of U2 snRNA (By similarity) (249 aa)
       
 
  0.912
AT3G62310
RNA helicase family protein; May be involved in pre-mRNA splicing (726 aa)
     
 
  0.882
AT5G14900
Helicase associated (HA2) domain-containing protein (301 aa)
     
 
  0.875
AT2G47250
RNA helicase family protein; May be involved in pre-mRNA splicing (729 aa)
     
 
  0.875
AT5G28740
pre-mRNA-splicing factor SYF1 (917 aa)
     
 
  0.866
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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