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AT1G17150 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G17150" - Pectin lyase-like protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G17150Pectin lyase-like protein (402 aa)    
Predicted Functional Partners:
AT4G03930
Pectinesterase 42; Acts in the modification of cell walls via demethylesterification of cell wall pectin (524 aa)
   
 
  0.831
AT1G11590
Pectinesterase 19; Acts in the modification of cell walls via demethylesterification of cell wall pectin (524 aa)
   
 
  0.830
AT4G02300
Pectinesterase 39; Acts in the modification of cell walls via demethylesterification of cell wall pectin (532 aa)
   
 
  0.821
AT1G16940
F-box/RNI-like/FBD-like domains-containing protein (434 aa)
     
   
  0.768
AT5G49180
Putative pectinesterase/pectinesterase inhibitor 58 58; Acts in the modification of cell walls via demethylesterification of cell wall pectin (571 aa)
   
 
  0.755
AT1G17160
Ribokinase (379 aa)
         
  0.733
AT1G17430
alpha/beta-Hydrolases superfamily protein (332 aa)
           
  0.732
AT1G17285
Uncharacterized protein (95 aa)
           
  0.732
AT1G17270
peptide-O-fucosyltransferase (564 aa)
           
  0.732
RTFL11
ROTUNDIFOLIA like 11 (119 aa)
           
  0.732
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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