STRINGSTRING
AT1G17200 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G17200" - UPF0497 membrane protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G17200UPF0497 membrane protein (204 aa)    
Predicted Functional Partners:
AT5G50540.1
Uncharacterized protein (113 aa)
           
  0.631
AT3G59880
Uncharacterized protein (125 aa)
           
  0.631
NAC064
NAC domain containing protein 64 (319 aa)
           
  0.631
AT2G44010
Uncharacterized protein (101 aa)
           
  0.631
AT1G17430
alpha/beta-Hydrolases superfamily protein (332 aa)
           
  0.601
AT1G17285
Uncharacterized protein (95 aa)
           
  0.601
AT1G17270
peptide-O-fucosyltransferase (564 aa)
           
  0.601
RTFL11
ROTUNDIFOLIA like 11 (119 aa)
           
  0.601
AT1G17230
Leucine-rich receptor-like protein kinase (1101 aa)
           
  0.601
AT1G17150
Pectin lyase-like protein (402 aa)
           
  0.601
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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