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AT1G17300 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G17300" - Unknown protein in Arabidopsis thaliana
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
protein homology
Your Input:
Gene Fusion
AT1G17300Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G17285.1); Has 27 Blast hits to 27 proteins in 4 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (116 aa)    
Predicted Functional Partners:
ABC transporter D family member 1; Contributes to the transport of fatty acids and their derivatives (acyl CoAs) across the peroxisomal membrane. Provides acetate to the glyoxylate cycle in developing seedlings. Involved in pollen tube elongation, ovule fertilization, and seeds germination after imbibition (controls the switch between the opposing developmental programs of dormancy and germination), probably by promoting beta-oxidation of storage lipids during gluconeogenesis. Required for biosynthesis of jasmonic acid and conversion of indole butyric acid to indole acetic acid. Confer [...] (1352 aa)
Hydroxymethylglutaryl-CoA lyase, mitochondrial; Involved in the catabolism of branched amino acids such as leucine (468 aa)
Phenylalanine--tRNA ligase beta subunit, cytoplasmic; tRNA synthetase beta subunit family protein; Its function is described as phenylalanine-tRNA ligase activity, RNA binding, magnesium ion binding, nucleotide binding, ATP binding; Involved in phenylalanyl-tRNA aminoacylation, translation; Located in phenylalanine-tRNA ligase complex, cytoplasm; Expressed in 23 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Putative DNA binding domain (InterPro-IPR009061), tRNA synthetase, B5 (InterPro-IPR005147), Phenylalanyl-tRNA synthetase, class IIc, [...] (598 aa)
Peroxisome biogenesis protein 5; Encodes the peroxisomal targeting signal type 1 receptor that facilitates peroxisomal protein translocation. It recognizes proteins with the PTS1 consensus sequence (tripeptide SKL or a conserved variant) at the extreme C terminus. The protein has several domains, including C-terminal tetratricopeptide repeat motifs which act in binding the C-terminal "SKL" targeting signal. The mechanism of transport has been worked out in other organisms- The receptor recognizes and binds cytosolic PTS1-containing proteins. The PEX5-PTS1 complex binds a PEX14/PEX1 [...] (728 aa)
Encodes a protein with similarity to yeast Pep16p, a membrane localized protein involved in peroxisome assembly and protein-trafficking. SSE1 mutant seeds do not accumulate oils and dessicated seeds have a shrunken appearance. Involved in protein and oil body biogenesis. SSE is expressed during seed development, reaching the highest peak in mature siliques. Expression in leaves and roots is low compared to cotyledons and flowers. Located in peroxisomes and endoplasmic reticulum. Homologous to the peroxin PEX16 and complements the pex16 mutants of the yeast Yarrowia lipolytica (367 aa)
Thiosulfate/3-mercaptopyruvate sulfurtransferase 1, mitochondrial; Encodes a sulfurtransferase/rhodaneses, which belongs to a group of enzymes widely distributed in all three phyla that catalyze the transfer of sulfur from a donor to a thiophilic acceptor substrate. The protein and transcript levels are NOT affected by senescence or exogenous cyanide, suggesting that sulfurtransferases are involved in cyanide detoxification (379 aa)
Thiosulfate/3-mercaptopyruvate sulfurtransferase 2; Catalyzes the transfer of a sulfur ion from a donor to cyanide or to other thiol compounds. Substrate preference is 3- mercaptopyruvate > thiosulfate. Involved in embryo and seed development (342 aa)
Transferases, transferring hexosyl groups; Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (489 aa)
Hydroxyacyl-thioester dehydratase type-like protein; Thioesterase superfamily protein; Its function is described as oxidoreductase activity; Involved in metabolic process; Contains the following InterPro domains- MaoC-like dehydratase (InterPro-IPR002539) (166 aa)
Iron-sulfur assembly protein IscA-like 2, mitochondrial; Involved in the assembly of mitochondrial iron-sulfur proteins. Probably involved in the binding of an intermediate of Fe/S cluster assembly (By similarity); Belongs to the HesB/IscA family (158 aa)
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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