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AT1G17310 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G17310" - MADS-box transcription factor family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G17310MADS-box transcription factor family protein; Its function is described as DNA binding, sequence-specific DNA binding transcription factor activity; Involved in regulation of transcription, DNA-dependent; Located in nucleus; Expressed in antipodal cell, sperm cell, carpel, female gametophyte; Expressed during 4 anthesis; Contains the following InterPro domains- Transcription factor, MADS-box (InterPro-IPR002100); BEST Arabidopsis thaliana protein match is- MADS-box transcription factor family protein (TAIR-AT1G72350.1); Has 5468 Blast hits to 5468 proteins in 649 species- Archae - 0; B [...] (217 aa)    
Predicted Functional Partners:
LFY
Floral meristem identity control protein LEAFY (LFY); Probable transcription factor that promotes early floral meristem identity in synergy with APETALA1. Is required subsequently for the transition of an inflorescence meristem into a floral meristem, by an immediate upstream regulation of the ABC classes of floral homeotic genes. Activates directly APETALA1, CAULIFLOWER and AGAMOUS, and indirectly APETALA3 and PISTILLATA with the cooperation of UFO; Belongs to the FLO/LFY family (420 aa)
           
  0.693
VRN1
AP2/B3-like transcriptional factor family protein; Involved in the regulation of vernalization. Acts as transcriptional repressor of FLC, a major target of the vernalization pathway. Binds DNA in vitro in a non-sequence- specific manner (341 aa)
           
  0.645
VRN2
Polycomb group protein VERNALIZATION 2; The VERNALIZATION2 (VRN2) gene mediates vernalization and encodes a nuclear-localized zinc finger protein with similarity to Polycomb group (PcG) proteins of plants and animals. In wild-type Arabidopsis, vernalization results in the stable reduction of the levels of the floral repressor FLC. In vrn2 mutants, FLC expression is downregulated normally in response to vernalization, but instead of remaining low, FLC mRNA levels increase when plants are returned to normal temperatures. VRN2 maintains FLC repression after a cold treatment, serving as a [...] (440 aa)
           
  0.644
CO
B-box type zinc finger protein with CCT domain; Transcription factor that acts in the long day flowering pathway and may mediate between the circadian clock and the control of flowering. Plays a role in the regulation of flowering time by acting on ’SUPPRESSOR OF OVEREXPRESSION OF CO1’, ’TERMINAL FLOWER 1’ and ’FLOWERING LOCUS T’. Also regulates P5CS2 and ACS10 (involved in proline and ethylene biosynthesis, respectively). Regulates the expression of NAKR1 by binding to the 5’-TGTG(N2- 3)ATG-3’ motif (373 aa)
       
 
  0.640
FT
PEBP (phosphatidylethanolamine-binding protein) family protein; Component of the mobile flower-promoting signal (floral stimulus or florigen). Promotes the transition from vegetative growth to flowering. Required for ’SEPALLATA3’ (SEP3) and ’FRUITFULL’ (FUL) accumulation in mature rosette leaves. Seems to acts in parallel with ’LEAFY’ to induce flowering by regulating ’APETALA1’. Translated in leaves and then transported to the shoot apical meristem where it activates the transcription of several floral meristem identity genes. May play a role in both the autonomous and the long-day fl [...] (175 aa)
           
  0.611
CDEF1
GDSL-like Lipase/Acylhydrolase superfamily protein; Member of the GDSL lipase/esterase family of proteins that functions as cutinase. Expressed in pollen and at the zone of lateral root emergence (348 aa)
           
  0.580
AP2
Integrase-type DNA-binding superfamily protein; Probable transcriptional activator that promotes early floral meristem identity. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Plays a central role in the specification of floral identity, particularly for the normal development of sepals and petals in the wild-type flower, by spatially controlling the expression domains of multiple floral organ identity genes. Acts as A class cadastral protein by repressing the C class floral homeotic gene AGAMOUS in association with other repressors lik [...] (432 aa)
           
  0.577
LATE
C2H2-like zinc finger protein; Acts as a transcriptional repressor. Prevents the photoperiodic and circadian clock-dependent transition to flowering in long days (LD) by repressing the expression of flowering time genes (e.g. FT, GI and CO) in the leaf vasculature, and by interfering with floral meristem identity genes at the apex (e.g. SOC1 and LFY) (173 aa)
           
  0.561
PAP21
Purple acid phosphatase 21 (PAP21); Its function is described as protein serine/threonine phosphatase activity, acid phosphatase activity; Involved in biological_process unknown; Located in endomembrane system; Expressed in petal, leaf whorl, fruit, sepal, flower; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- Metallophosphoesterase (InterPro-IPR004843), Purple acid phosphatase-like, N-terminal (InterPro-IPR008963); BEST Arabidopsis thaliana protein match is- purple acid phosphatase 22 (TAIR-AT3G52820.1); Has 2230 Blast [...] (437 aa)
           
  0.525
AT5G08720
Polyketide cyclase/dehydrase/lipid transporter; Contains the following InterPro domains- Streptomyces cyclase/dehydrase (InterPro-IPR005031); BEST Arabidopsis thaliana protein match is- Polyketide cyclase / dehydrase and lipid transport protein (TAIR-AT4G01650.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (719 aa)
           
  0.504
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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