STRINGSTRING
HLL protein (Arabidopsis thaliana) - STRING interaction network
"HLL" - HUELLENLOS in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HLLHUELLENLOS; Binds to 23S rRNA in mitochondrion (By similarity). Required for the formation of the proximal region of the ovule primordium during floral organogenesis, thus participating in patterning and growth of ovule. Also regulates the initiation and/or maintenance of integument and embryo sac ontogenesis. Prevents inappropriate cell death in the young ovule (196 aa)    
Predicted Functional Partners:
AT4G30800
40S ribosomal protein S11-2 (159 aa)
   
  0.999
RPL3P
50S ribosomal protein L3-2; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (324 aa)
 
  0.999
RPL5B
Ribosomal protein L5 B; Binds to 5S ribosomal RNA (301 aa)
   
  0.999
AT5G45775.2
60S ribosomal protein L11-2; Binds to 5S ribosomal RNA (182 aa)
   
  0.999
AT5G60670
60S ribosomal protein L12-3; Binds directly to 26S ribosomal RNA (166 aa)
   
  0.999
RPL16A
60S ribosomal protein L11-1; Binds to 5S ribosomal RNA (182 aa)
   
  0.999
RPL5A
Ribosomal protein L5; Binds to 5S ribosomal RNA (301 aa)
   
  0.999
AT3G58700.1
60S ribosomal protein L11-2 (182 aa)
   
  0.999
AT2G18400
Large subunit ribosomal protein L6 (102 aa)
 
  0.999
EMB2207
Ribosomal protein 1 (389 aa)
   
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (19%) [HD]