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STRINGSTRING
AT1G17665 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G17665" - Unknown protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AT1G17665Unknown protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Expressed in 15 plant structures; Expressed during 11 growth stages; Has 149 Blast hits to 146 proteins in 39 species- Archae - 0; Bacteria - 4; Metazoa - 21; Fungi - 5; Plants - 30; Viruses - 0; Other Eukaryotes - 89 (source- NCBI BLink) (338 aa)    
Predicted Functional Partners:
AT4G33980
Uncharacterized protein; Its function is described as molecular_function unknown; Involved in response to karrikin; Located in cellular_component unknown; Expressed in 24 plant structures; Expressed during 15 growth stages; BEST Arabidopsis thaliana protein match is- cold regulated gene 27 (TAIR-AT5G42900.3) (232 aa)
     
        0.863
COR27
Uncharacterized protein At5g42900/MBD2_9; Cold regulated gene 27; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G33980.1); Has 74 Blast hits to 74 proteins in 12 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 74; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (246 aa)
     
        0.842
COL9
Zinc finger protein CONSTANS-LIKE 9; This gene belongs to the CO (CONSTANS) gene family. This gene family is divided in three subgroups- groups III, to which COL9 belongs, is characterised by one B-box (supposed to regulate protein-protein interactions) and a second diverged zinc finger. COL9 downregulates expression of CO (CONSTANS) as well as FT and SOC1 which are known regulatory targets of CO (372 aa)
     
        0.830
BBX8
B-box type zinc finger protein with CCT domain; Its function is described as sequence-specific DNA binding transcription factor activity, zinc ion binding; Located in plasma membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- CCT domain (InterPro-IPR010402), Zinc finger, B-box (InterPro-IPR000315); BEST Arabidopsis thaliana protein match is- CONSTANS-like 9 (TAIR-AT3G07650.4); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Euka [...] (373 aa)
     
        0.828
PRR3
Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL; Belongs to the ARR-like family (522 aa)
     
        0.742
ALDH6B2
Arabidopsis thaliana methylmalonate-semialdehyde dehydrogenase (607 aa)
     
 
  0.733
AT1G04190
Tetratricopeptide repeat (TPR)-like superfamily protein; Its function is described as binding; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Tetratricopeptide TPR-1 (InterPro-IPR001440), Tetratricopeptide-like helical (InterPro-IPR011990), Tetratricopeptide repeat-containing (InterPro-IPR013026), Tetratricopeptide repeat (InterPro-IPR019734); BEST Arabidopsis thaliana protein match is- stress-inducible protein, putative (TAIR-AT1G62740.1); Has 2 [...] (328 aa)
     
 
  0.721
RIBA2
Monofunctional riboflavin biosynthesis protein RIBA 2, chloroplastic; Involved in riboflavin biosynthesis. Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy- 2-butanone 4-phosphate. RIBA2 and RIBA3 together are not able to complement the loss of function of RIBA1; In the N-terminal section; belongs to the DHBP synthase family (476 aa)
     
   
  0.697
AT1G07050
Uncharacterized protein At1g07050; CCT motif family protein; Contains the following InterPro domains- CCT domain (InterPro-IPR010402); BEST Arabidopsis thaliana protein match is- CCT motif family protein (TAIR-AT4G25990.1); Has 1772 Blast hits to 1772 proteins in 105 species- Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 2; Plants - 1711; Viruses - 0; Other Eukaryotes - 58 (source- NCBI BLink) (195 aa)
     
        0.688
TOC1
CCT motif -containing response regulator protein; Pseudo response regulator involved in the generation of circadian rhythms. TOC1 appears to shorten the period of circumnutation speed. TOC1 contributes to the plant fitness (carbon fixation, biomass) by influencing the circadian clock period. PRR3 may increase the stability of TOC1 by preventing interactions between TOC1 and the F-box protein ZTL. Expression of TOC1 is correlated with rhythmic changes in chromatin organization (618 aa)
     
        0.685
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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