• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
BETA-TIP protein (Arabidopsis thaliana) - STRING interaction network
"BETA-TIP" - Beta-tonoplast intrinsic protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BETA-TIPBeta-tonoplast intrinsic protein; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes (267 aa)    
Predicted Functional Partners:
emb1379
Uncharacterized protein At5g21140; Embryo defective 1379 (emb1379); Contains the following InterPro domains- Nse1 non-SMC component of SMC5-6 complex (InterPro-IPR011513), Zinc finger, RING-like (InterPro-IPR014857); Has 255 Blast hits to 254 proteins in 123 species- Archae - 0; Bacteria - 0; Metazoa - 91; Fungi - 105; Plants - 49; Viruses - 0; Other Eukaryotes - 10 (source- NCBI BLink) (312 aa)
           
  0.641
GLR2.7
Glutamate receptor 2.7; Glutamate-gated receptor that probably acts as non- selective cation channel. May be involved in light-signal transduction and calcium homeostasis via the regulation of calcium influx into cells (952 aa)
           
  0.625
ENODL1
Similarity to phytocyanin/early nodulin-like protein; Early nodulin-like protein 1 (ENODL1); Its function is described as electron carrier activity, copper ion binding; Located in plasma membrane, anchored to membrane; Expressed in 22 plant structures; Expressed during 9 growth stages; Contains the following InterPro domains- Plastocyanin-like (InterPro-IPR003245), Cupredoxin (InterPro-IPR008972); BEST Arabidopsis thaliana protein match is- early nodulin-like protein 2 (TAIR-AT4G27520.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fung [...] (370 aa)
           
  0.618
EMB1303
Uncharacterized protein F14G9.26; Embryo defective 1303 (emb1303); Its function is described as molecular_function unknown; Involved in embryo development ending in seed dormancy; Located in chloroplast; Expressed in 23 plant structures; Expressed during 15 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G30475.1); Has 62 Blast hits to 62 proteins in 16 species- Archae - 0; Bacteria - 2; Metazoa - 5; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 2 (source- NCBI BLink) (154 aa)
           
  0.579
CBL7
Calcineurin B-like protein 7; Acts as a calcium sensor. CBL proteins interact with CIPK serine-threonine protein kinases. Binding of a CBL protein to the regulatory NAF domain of a CIPK protein lead to the activation of the kinase in a calcium-dependent manner (214 aa)
     
 
  0.573
AT2G20050
Protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein; Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases; Its function is described as cAMP-dependent protein kinase regulator activity, protein kinase activity, protein serine/threonine phosphatase activity, catalytic activity, ATP binding; Involved in protein amino acid phosphorylation, protein amino acid dephosphorylation, N-terminal protein myristoylation, regulation of protein amino acid phosphoryl [...] (1094 aa)
   
 
  0.552
MPK15
Mitogen-activated protein kinase 15; Member of MAP Kinase; Belongs to the protein kinase superfamily. CMGC Ser/Thr protein kinase family. MAP kinase subfamily (576 aa)
       
 
  0.538
AT2G26810
Putative methyltransferase family protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in cellular_component unknown; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Methyltransferase-16, putative (InterPro-IPR019410); BEST Arabidopsis thaliana protein match is- S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR-AT2G26200.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 342 [...] (256 aa)
           
  0.526
CIPK4
CBL-interacting serine/threonine-protein kinase 4; CIPK serine-threonine protein kinases interact with CBL proteins. Binding of a CBL protein to the regulatory NAF domain of CIPK protein lead to the activation of the kinase in a calcium- dependent manner (By similarity) (426 aa)
           
  0.499
OLEO2
Oleosin 21.2 kDa; Encodes oleosin2, a protein found in oil bodies, involved in seed lipid accumulation. Suppression of OLEO1 (and OLEO2) resulted in an aberrant phenotype of embryo cells that contain unusually large oilbodies that are not normally observed in seeds. Changes in the size of oilbodies caused disruption of storage organelles, altering accumulation of lipids and proteins and causing delay in germination. Functions in freezing tolerance of seeds (199 aa)
     
   
  0.494
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (12%) [HD]