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AT1G17960 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G17960" - Probable threonine--tRNA ligase, cytoplasmic in Arabidopsis thaliana
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G17960Probable threonine--tRNA ligase, cytoplasmic; Threonyl-tRNA synthetase; Its function is described as nucleotide binding, aminoacyl-tRNA ligase activity, threonine-tRNA ligase activity, ATP binding; Involved in threonyl-tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; Located in cytoplasm; Expressed in inflorescence meristem, root, pedicel; Expressed during 4 anthesis; Contains the following InterPro domains- Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain (InterPro-IPR018163), Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conser [...] (458 aa)    
Predicted Functional Partners:
AT4G10320
tRNA synthetase class I (I, L, M and V) family protein; Its function is described as isoleucine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, zinc ion binding, ATP binding; Involved in response to cadmium ion, tRNA aminoacylation for protein translation; Located in cytosol; Expressed in male gametophyte, guard cell, epidermis, cultured cell, pollen tube; Expressed during L mature pollen stage, M germinated pollen stage; Contains the following InterPro domains- Aminoacyl-tRNA synthetase, class I, conserved site (InterPro-IPR001412), Isoleucyl-tRNA synthetase [...] (1190 aa)
     
 
  0.982
AT4G13780
methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative; Its function is described as methionine-tRNA ligase activity, tRNA binding, aminoacyl-tRNA ligase activity, nucleotide binding, ATP binding; Involved in response to cadmium ion, methionyl-tRNA aminoacylation; Located in cytosol; Expressed in 26 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Aminoacyl-tRNA synthetase, class I, conserved site (InterPro-IPR001412), Nucleic acid-binding, OB-fold (InterPro-IPR012340), Aminoacyl-tRNA synthetase, class I (M [...] (797 aa)
     
 
  0.980
ATKRS-1
Lysine--tRNA ligase, cytoplasmic; Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction- the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA (By similarity). Promotes aminoacylation of non-cognate tRNAs and translational recoding of lysine at nonsense codons; Belongs to the class-II aminoacyl-tRNA synthetase family (626 aa)
   
 
  0.975
AT4G39280
phenylalanyl-tRNA synthetase, putative / phenylalanine--tRNA ligase, putative; Its function is described as phenylalanine-tRNA ligase activity, tRNA binding, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; Involved in phenylalanyl-tRNA aminoacylation, tRNA aminoacylation, translation, tRNA aminoacylation for protein translation; Located in cytoplasm; Expressed in 23 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Phenylalanyl-tRNA synthetase, class IIc, alpha subunit (InterPro-IPR004529), Phenylalanyl-tRNA synthetase alpha [...] (485 aa)
   
 
  0.956
AT3G23145
Zinc ion binding;isoleucine-tRNA ligases;ATP binding;aminoacyl-tRNA ligases;nucleotide binding; Its function is described as nucleotide binding, aminoacyl-tRNA ligase activity, isoleucine-tRNA ligase activity, zinc ion binding, ATP binding; Involved in translation, tRNA aminoacylation for protein translation; Located in cytoplasm; Contains the following InterPro domains- Valyl/Leucyl/Isoleucyl-tRNA synthetase, class Ia, editing (InterPro-IPR009008), Aminoacyl-tRNA synthetase, class Ia (InterPro-IPR002300), Isoleucyl-tRNA synthetase (InterPro-IPR018353); BEST Arabidopsis thaliana protei [...] (158 aa)
     
 
  0.951
AT1G09620
Leucine--tRNA ligase, cytoplasmic; Catalyzes the specific attachment of an amino acid to its cognate tRNA in a two step reaction- the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA (1091 aa)
   
 
  0.948
AT3G44740
Class II aaRS and biotin synthetases superfamily protein; Its function is described as glycine-tRNA ligase activity, nucleotide binding, aminoacyl-tRNA ligase activity, ATP binding; Involved in translation, tRNA aminoacylation for protein translation, glycyl-tRNA aminoacylation; Located in cytoplasm; Expressed in 21 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain (InterPro-IPR002314), Glycyl-tRNA synthetase, alpha2 dimer (InterPro-IPR002315), Glycyl-tRNA synthetase, alpha2 d [...] (244 aa)
     
 
  0.944
AT1G29880
glycyl-tRNA synthetase / glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Is also able produce diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs (729 aa)
     
 
  0.944
AT1G29870
tRNA synthetase class II (G, H, P and S) family protein; Catalyzes the attachment of glycine to tRNA(Gly). Is also able produce diadenosine tetraphosphate (Ap4A), a universal pleiotropic signaling molecule needed for cell regulation pathways, by direct condensation of 2 ATPs (By similarity); Belongs to the class-II aminoacyl-tRNA synthetase family (463 aa)
     
 
  0.944
OVA5
Lysine--tRNA ligase, chloroplastic/mitochondrial; Catalyzes the specific attachment of an amino acid to its cognate tRNA in a 2 step reaction- the amino acid (AA) is first activated by ATP to form AA-AMP and then transferred to the acceptor end of the tRNA (602 aa)
   
 
  0.938
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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