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CDKD1;3 protein (Arabidopsis thaliana) - STRING interaction network
"CDKD1;3" - Cyclin-dependent kinase D-3 in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
CDKD1;3Cyclin-dependent kinase D-3; May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II (391 aa)    
Predicted Functional Partners:
AT4G30820
CDK-activating kinase assembly factor MAT1 (178 aa)
     
  0.999
CYCH;1
Cyclin H;1; Associates with CDK-2 and CDK-3 and activates the CDK kinases (336 aa)
     
  0.999
AT4G30825
Pentatricopeptide repeat-containing protein (904 aa)
     
  0.999
AT1G18340
Transcription initiation factor TFIIH subunit H3; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA (301 aa)
     
  0.994
XPB2
DNA repair helicase XPB2; Putative ATP-dependent 3’-5’ DNA helicase involved in nucleotide excision repair (NER) of DNA. May be involved in RNA transcription by RNA polymerase II. Acts by opening DNA around either the RNA transcription start site or the DNA damage (766 aa)
     
  0.994
CYCT1;1
Cyclin T1-1 (247 aa)
     
  0.994
XPB1
DNA repair helicase XPB1; Putative ATP-dependent 3’-5’ DNA helicase involved in nucleotide excision repair (NER) of DNA. May be involved in RNA transcription by RNA polymerase II. Acts by opening DNA around either the RNA transcription start site or the DNA damage (By similarity). Required during the early stages of development, including seed germination (PubMed-11737776) (767 aa)
       
  0.993
CYCT1;4
cyclin-T1-4 (541 aa)
     
  0.992
NRPB1
RNA polymerase II large subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Largest and catalytic component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Forms the polymerase active center together with the second largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. NRPB1 is part of the core element with the central large cleft, the cl [...] (1839 aa)
     
  0.992
AT5G45190
cyclin-T1-5 (590 aa)
     
  0.991
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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