• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G18335 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18335" - Acyl-CoA N-acyltransferases in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G18335Acyl-CoA N-acyltransferases (NAT) superfamily protein; Its function is described as N-acetyltransferase activity; Involved in metabolic process; Located in cellular_component unknown; Contains the following InterPro domains- GCN5-related N-acetyltransferase, C-terminal (InterPro-IPR022610), GCN5-related N-acetyltransferase (InterPro-IPR000182), Acyl-CoA N-acyltransferase (InterPro-IPR016181); Has 35333 Blast hits to 34131 proteins in 2444 species- Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source- NCBI BLink) (269 aa)    
Predicted Functional Partners:
MCC1
Histone acetyltransferase MCC1; Encodes MEIOTIC CONTROL OF CROSSOVERS1 (MCC1), a GCN5-related histone N-acetyltransferase. MCC1 appeared to be required in meiosis for normal chiasma number and distribution and for chromosome segregation. Activation tagging line has increased level of histone H3 acetylation (247 aa)
           
  0.988
AT2G32020
Acyl-CoA N-acyltransferases (NAT) superfamily protein; Its function is described as N-acetyltransferase activity; Involved in response to abscisic acid stimulus, metabolic process; Located in cellular_component unknown; Expressed in stem, cotyledon, hypocotyl, root, stamen; Expressed during 4 anthesis, petal differentiation and expansion stage; Contains the following InterPro domains- GCN5-related N-acetyltransferase, C-terminal (InterPro-IPR022610), GCN5-related N-acetyltransferase (InterPro-IPR000182), Acyl-CoA N-acyltransferase (InterPro-IPR016181); BEST Arabidopsis thaliana protein [...] (183 aa)
           
  0.970
ATMAK3
Acyl-CoA N-acyltransferases (NAT) superfamily protein; Probably required for N-acetylation of some chloroplast precursor proteins and efficient accumulation of thylakoid multiprotein complexes. In yeast, can replace the NatC complex (composed of MAK3, MAK10 and MAK31) by acetylating N termini of endogenous proteins and the N-terminus Met of L-A virus Gag protein. However, the formation of a NatC complex is not required for this function; Belongs to the acetyltransferase family. MAK3 subfamily (190 aa)
           
  0.958
PSD
ARM repeat superfamily protein; Encodes a karyopherin, specifically the Arabidopsis ortholog of LOS1/XPOT, a protein that mediates nuclear export of tRNAs in yeast and mammals. PSD is capable of rescuing the tRNA export defect of los1 in S. cerevisiae. psd mutants display disrupted initiation of the shoot apical meristem and delay leaf initiation after germination; they also display delayed transition from vegetative to reproductive development; Belongs to the exportin family (988 aa)
       
      0.896
AT3G33530
Transducin family protein / WD-40 repeat family protein; Its function is described as nucleotide binding; Involved in biological_process unknown; Located in chloroplast; Expressed in 22 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- WD40 repeat-like-containing domain (InterPro-IPR011046), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943); BEST Arabidopsis thaliana protein match is- Transducin family protein / WD-40 repeat family protein (TAIR-AT2G26610.1) (1376 aa)
       
      0.857
AT2G26610
Transducin family protein / WD-40 repeat family protein; Its function is described as molecular_function unknown; Located in chloroplast; Contains the following InterPro domains- WD40 repeat-like-containing domain (InterPro-IPR011046), WD40/YVTN repeat-like-containing domain (InterPro-IPR015943); BEST Arabidopsis thaliana protein match is- Transducin family protein / WD-40 repeat family protein (TAIR-AT3G33530.1); Has 171 Blast hits to 144 proteins in 55 species- Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 41; Viruses - 0; Other Eukaryotes - 25 (source- NCBI BLink) (1249 aa)
       
      0.857
LAG1
TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein; Mediates resistance to sphinganine-analog mycotoxins (SAMs) by restoring the sphingolipid biosynthesis. Could salvage the transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi apparatus in ceramides-depleted cells after SAM exposure (By similarity) (310 aa)
     
   
  0.839
AT1G03150
N-terminal acetyltransferase B complex catalytic subunit NAA20; Catalytic subunit of the NatB N-alpha-acetyltransferase complex. Involved in plant immunity through the regulation of SNC1 stability; Belongs to the acetyltransferase family. ARD1 subfamily (174 aa)
     
   
  0.835
AT5G13780
N-terminal acetyltransferase A complex catalytic subunit NAA10; Catalytic subunit of the NatA N-alpha-acetyltransferase complex. Required for male gametocyte development, embryogenesis, suspensor development and the formation of the quiescent center (QC) in the root meristem. Involved in plant immunity through the regulation of SNC1 and RPM1 stability (192 aa)
           
  0.833
AT5G58450
N-terminal acetyltransferase B complex auxiliary subunit NAA25; Auxiliary subunit of the NatB N-alpha-acetyltransferase complex. Required for flowering time regulation and for vegetative and reproductive plant development; Belongs to the MDM20/NAA25 family (1065 aa)
           
  0.821
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (9%) [HD]