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AT1G18340 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18340" - Transcription initiation factor TFIIH subunit H3 in Arabidopsis thaliana
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second shell of interactors
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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AT1G18340Transcription initiation factor TFIIH subunit H3; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA (301 aa)    
Predicted Functional Partners:
UVH6
DNA repair helicase UVH6; Putative ATP-dependent 5’-3’ DNA helicase involved in nucleotide excision repair (NER) of UV-damaged DNA. May open DNA around the damage. Essential during plant growth. May negatively regulate a common response program mediated by UV damage and heat stress, that leads to tissue death and reduced chloroplast function (758 aa)
     
  0.998
AT4G17020
Transcription factor-related; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA (482 aa)
     
  0.997
GTF2H2
General transcription factor II H2; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for transcription, and is involved in nucleotide excision repair (NER) of damaged DNA. Can restore UV resistance in the NER-deficient ssl1-1 yeast mutant (421 aa)
     
  0.997
AT3G61420
Transcription initiation factor TFIIH subunit H1; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA (579 aa)
     
  0.997
AT1G55750
Transcription initiation factor TFIIH subunit H1; Component of the general transcription and DNA repair factor IIH (TFIIH) core, which is essential for both basal and activated transcription, and is involved in nucleotide excision repair (NER) of damaged DNA (591 aa)
     
  0.997
XPB1
DNA repair helicase XPB1; Putative ATP-dependent 3’-5’ DNA helicase involved in nucleotide excision repair (NER) of DNA. May be involved in RNA transcription by RNA polymerase II. Acts by opening DNA around either the RNA transcription start site or the DNA damage (By similarity). Required during the early stages of development, including seed germination (PubMed-11737776) (767 aa)
     
  0.996
XPB2
DNA repair helicase XPB2; Putative ATP-dependent 3’-5’ DNA helicase involved in nucleotide excision repair (NER) of DNA. May be involved in RNA transcription by RNA polymerase II. Acts by opening DNA around either the RNA transcription start site or the DNA damage (766 aa)
     
  0.996
AT4G30820
CDK-activating kinase assembly factor MAT1 (178 aa)
     
  0.996
CDKD1;3
Cyclin-dependent kinase D-3; May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II (391 aa)
     
  0.994
CDKD1;1
Cyclin-dependent kinase D-1 (398 aa)
     
  0.994
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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