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AT1G18485 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18485" - Pentatricopeptide repeat-containing protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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Textmining
[Homology]
Score
AT1G18485Pentatricopeptide repeat-containing protein (970 aa)    
Predicted Functional Partners:
emb2726
Embryo defective 2726; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome (953 aa)
     
        0.508
AT4G09040
RNA recognition motif-containing protein (304 aa)
     
      0.471
EMB25
EMBRYO DEFECTIVE 25; RNA helicase involved in group II intron splicing (PubMed-26147377). Essential protein required during embryogenesis. Involved in post-transcriptional gene silencing. Modulates the determination of cell fate. Necessary for normal plasmodesmata (PD) development and aperture regulation (1171 aa)
     
        0.463
AT3G25660
Amidase family protein; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in chloroplasts and mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho- Glu-tRNA(Gln) (537 aa)
     
        0.456
AT5G14460
tRNA pseudouridine synthase B (540 aa)
     
        0.455
emb1138
Embryo defective 1138 (748 aa)
     
        0.454
AT3G02450
Putative cell division protein ftsH; Might be involved in chaperone functions or play a structural role in the thylakoid FtsH complex (622 aa)
     
   
  0.451
SURF1
SURFEIT 1; Probably involved in the biogenesis of the COX complex (354 aa)
     
   
  0.449
AT1G48510
Surfeit locus 1 cytochrome c oxidase biogenesis protein; May be involved in the biogenesis of the COX complex (384 aa)
     
   
  0.449
EMB1586
Embryo defective 1586; Essential protein required during embryogenesis. Required for mitochondrial metabolism. Necessary for normal plasmodesmata (PD) development and aperture regulation (551 aa)
     
        0.448
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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