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AT1G18540 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18540" - 60S ribosomal protein L6-1 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G1854060S ribosomal protein L6-1 (233 aa)    
Predicted Functional Partners:
AT2G34480
60S ribosomal protein L18a-2 (178 aa)
     
  0.999
AT4G16720
60S ribosomal protein L15-1 (204 aa)
     
  0.999
AT3G04840
Ribosomal protein S3Ae (262 aa)
     
  0.999
BBC1
Breast basic conserved 1 (206 aa)
     
  0.999
AT1G41880
60S ribosomal protein L35a-2 (111 aa)
     
  0.999
RPL18
Ribosomal protein L18 (187 aa)
   
  0.999
AT2G01250
60S ribosomal protein L7-2 (242 aa)
   
  0.999
AT3G04230
40S ribosomal protein S16-2 (146 aa)
   
  0.999
AT5G02870
60S ribosomal protein L4-2 (407 aa)
   
  0.999
AT4G17390
60S ribosomal protein L15-2 (204 aa)
     
  0.999
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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