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AT1G18660 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18660" - Zinc finger (C3HC4-type RING finger) family protein in Arabidopsis thaliana
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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AT1G18660Zinc finger (C3HC4-type RING finger) family protein; Its function is described as ATP-dependent peptidase activity, binding, zinc ion binding; Involved in proteolysis; Expressed in 22 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Peptidase S16, lon N-terminal (InterPro-IPR003111), Zinc finger, RING-type, conserved site (InterPro-IPR017907), Tetratricopeptide-like helical (InterPro-IPR011990), Zinc finger, RING-type (InterPro-IPR001841), Zinc finger, C3HC4 RING-type (InterPro-IPR018957); BEST Arabidopsis thaliana protein match is- ATP-depe [...] (491 aa)    
Predicted Functional Partners:
AT1G53980
Ubiquitin-like superfamily protein; BEST Arabidopsis thaliana protein match is- Ubiquitin-like superfamily protein (TAIR-AT1G53950.1); Has 4877 Blast hits to 1479 proteins in 398 species- Archae - 0; Bacteria - 0; Metazoa - 2141; Fungi - 549; Plants - 1364; Viruses - 11; Other Eukaryotes - 812 (source- NCBI BLink) (91 aa)
     
  0.973
AT1G53950
Ubiquitin-like superfamily protein; Contains the following InterPro domains- Ubiquitin subgroup (InterPro-IPR019956), Ubiquitin (InterPro-IPR000626), Ubiquitin supergroup (InterPro-IPR019955); BEST Arabidopsis thaliana protein match is- Ubiquitin family protein (TAIR-AT4G02890.4); Has 10458 Blast hits to 4586 proteins in 685 species- Archae - 0; Bacteria - 26; Metazoa - 4341; Fungi - 1141; Plants - 2617; Viruses - 325; Other Eukaryotes - 2008 (source- NCBI BLink) (216 aa)
     
  0.973
AT1G53930
Ubiquitin-like superfamily protein; Contains the following InterPro domains- Ubiquitin subgroup (InterPro-IPR019956), Ubiquitin conserved site (InterPro-IPR019954), Ubiquitin (InterPro-IPR000626), Ubiquitin supergroup (InterPro-IPR019955); BEST Arabidopsis thaliana protein match is- polyubiquitin 10 (TAIR-AT4G05320.6); Has 11184 Blast hits to 6096 proteins in 709 species- Archae - 0; Bacteria - 19; Metazoa - 4709; Fungi - 1331; Plants - 2917; Viruses - 171; Other Eukaryotes - 2037 (source- NCBI BLink) (158 aa)
     
  0.973
SQN
Peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. Involved in promoting the expression of the juvenile phase of vegetative development, and, to a lower extent, in regulating the positioning of floral buds, floral morphogenesis and the expression of HSPs (361 aa)
   
 
  0.969
AT5G58110
Chaperone binding;ATPase activators; Its function is described as ATPase activator activity, chaperone binding; Involved in biological_process unknown; Located in cytoplasm; Expressed in 23 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- Activator of Hsp90 ATPase, N-terminal (InterPro-IPR015310); Has 297 Blast hits to 292 proteins in 99 species- Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 2; Plants - 78; Viruses - 0; Other Eukaryotes - 56 (source- NCBI BLink) (196 aa)
     
 
  0.960
AT3G12050
Uncharacterized protein T21B14.13; Aha1 domain-containing protein; Its function is described as ATPase activator activity, chaperone binding; Involved in response to stress; Located in cytoplasm; Expressed in 24 plant structures; Expressed during 16 growth stages; Contains the following InterPro domains- Activator of Hsp90 ATPase, N-terminal (InterPro-IPR015310), Activator of Hsp90 ATPase homologue 1-like (InterPro-IPR013538); Has 600 Blast hits to 579 proteins in 214 species- Archae - 0; Bacteria - 24; Metazoa - 217; Fungi - 180; Plants - 73; Viruses - 0; Other Eukaryotes - 106 (sourc [...] (360 aa)
     
 
  0.960
AT4G02450
HSP20-like chaperones superfamily protein; Its function is described as molecular_function unknown; Located in plasma membrane; Expressed in 24 plant structures; Expressed during 15 growth stages; Contains the following InterPro domains- CS-like domain (InterPro-IPR007052), HSP20-like chaperone (InterPro-IPR008978), CS domain (InterPro-IPR017447); BEST Arabidopsis thaliana protein match is- HSP20-like chaperones superfamily protein (TAIR-AT3G03773.1); Has 51861 Blast hits to 12232 proteins in 1049 species- Archae - 75; Bacteria - 28612; Metazoa - 10233; Fungi - 1929; Plants - 4069; Vir [...] (241 aa)
     
 
  0.956
AT3G03773
HSP20-like chaperones superfamily protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; Contains the following InterPro domains- CS-like domain (InterPro-IPR007052), HSP20-like chaperone (InterPro-IPR008978), CS domain (InterPro-IPR017447); BEST Arabidopsis thaliana protein match is- HSP20-like chaperones superfamily protein (TAIR-AT4G02450.2); Has 706 Blast hits to 706 proteins in 214 species- Archae - 0; Bacteria - 0; Metazoa - 339; Fungi - 125; Plants - 130; Viruses - 0; Other Eukaryotes - 112 (sourc [...] (204 aa)
     
 
  0.956
UPL4
E3 ubiquitin-protein ligase UPL4; Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins (1502 aa)
     
  0.940
KAK
HEAT repeat ;HECT-domain (ubiquitin-transferase); Probable E3 ubiquitin-protein ligase which mediates ubiquitination and subsequent proteasomal degradation of target proteins. Involved in the repression of endoreduplication process and the cell morphogenesis in the trichomes (1888 aa)
     
  0.940
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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