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STRINGSTRING
AT1G18740 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18740" - Protein of unknown function in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
AT1G18740Protein of unknown function (DUF793); Its function is described as molecular_function unknown; Involved in biological_process unknown; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Protein BYPASS related (InterPro-IPR008511); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF793) (TAIR-AT1G74450.1); Has 167 Blast hits to 164 proteins in 20 species- Archae - 3; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 164; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (382 aa)    
Predicted Functional Partners:
AT4G29780
Uncharacterized protein At4g29780; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT5G12010.1); Has 945 Blast hits to 944 proteins in 87 species- Archae - 0; Bacteria - 0; Metazoa - 519; Fungi - 43; Plants - 365; Viruses - 0; Other Eukaryotes - 18 (source- NCBI BLink) (540 aa)
     
   
  0.980
AT5G12010
Uncharacterized protein F14F18_180; Unknown protein; Involved in response to salt stress; Located in chloroplast, plasma membrane, membrane; Expressed in 23 plant structures; Expressed during 13 growth stages; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G29780.1); Has 1807 Blast hits to 1807 proteins in 277 species- Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source- NCBI BLink) (502 aa)
           
  0.951
AT4G27652
At4g27652; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT4G27657.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (70 aa)
     
   
  0.927
AT1G74450
Protein of unknown function (DUF793); Its function is described as molecular_function unknown; Involved in biological_process unknown; Expressed in 24 plant structures; Expressed during 14 growth stages; Contains the following InterPro domains- Protein BYPASS related (InterPro-IPR008511); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF793) (TAIR-AT1G18740.1); Has 215 Blast hits to 212 proteins in 19 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (397 aa)
     
   
0.857
BBX17
B-box type zinc finger protein with CCT domain; Its function is described as sequence-specific DNA binding transcription factor activity, zinc ion binding; Involved in regulation of transcription; Located in intracellular; Contains the following InterPro domains- CCT domain (InterPro-IPR010402), Zinc finger, B-box (InterPro-IPR000315); BEST Arabidopsis thaliana protein match is- B-box type zinc finger protein with CCT domain (TAIR-AT1G73870.1); Has 3177 Blast hits to 2366 proteins in 131 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3069; Viruses - 0; Other Eukary [...] (326 aa)
           
  0.732
RDUF1
Zinc finger (C3HC4-type RING finger) family protein; E3 ubiquitin-protein ligase involved in the positive regulation of abscisic acid-dependent drought stress responses. Involved in the positive regulation of responses to salt and osmotic stresses during seed germination and early seedling development. Possesses E3 ubiquitin ligase activity in vitro (395 aa)
     
        0.659
AT2G30020
Protein phosphatase 2C family protein; Protein phosphatase that negatively regulates defense respones. Inactivates MPK4 and MPK6 MAP kinases involved in stress and defense signaling (396 aa)
     
        0.645
RMF
Encodes a nuclear localized F-box protein that is involved in tapetal layer degeneration and pollen development. Interacts with ASK1 and that interaction is mediated by the F-box domain (354 aa)
           
  0.643
AT2G25780
Protein of unknown function (DUF1677); Contains the following InterPro domains- Protein of unknown function DUF1677, plant (InterPro-IPR012876); BEST Arabidopsis thaliana protein match is- Protein of unknown function (DUF1677) (TAIR-AT1G79770.1); Has 244 Blast hits to 244 proteins in 14 species- Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 244; Viruses - 0; Other Eukaryotes - 0 (source- NCBI BLink) (153 aa)
           
  0.567
AT1G55460
DNA/RNA-binding protein Kin17, conserved region; Promotes the copper deficiency response by direct interaction with SPL7. Acts with SPL7 in a common pathway to promote copper-responsive genes and alleviate oxidative stress during copper-limiting periods. May promote SPL7 function when copper is limiting. Participates in the control of general plant growth and development, and in the response to counteract the negative effects of UV radiation (411 aa)
           
  0.552
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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