STRINGSTRING
AT1G18740 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18740" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G18740Uncharacterized protein (382 aa)    
Predicted Functional Partners:
AT4G29780
Uncharacterized protein (540 aa)
     
   
  0.944
AT4G27652
Uncharacterized protein (70 aa)
     
   
  0.891
AT1G74450
Uncharacterized protein (397 aa)
     
   
0.839
AT5G12010
Uncharacterized protein (502 aa)
           
  0.810
AT1G77570
Winged helix-turn-helix transcription repressor DNA-binding (147 aa)
           
  0.780
RDUF1
C3H4 type zinc finger protein (395 aa)
     
        0.766
AT2G30020
Putative protein phosphatase 2C 25; Protein phosphatase that negatively regulates defense respones. Inactivates MPK4 and MPK6 MAP kinases involved in stress and defense signaling (396 aa)
     
        0.748
AT1G55460
DNA/RNA-binding protein Kin17, conserved region (411 aa)
           
  0.734
TIP
TCV-interacting protein; Transcription activator essential for the anti-viral defense called virus basal resistance response pathway (PubMed-11041886, PubMed-15629774, PubMed-18785827, PubMed-24418554). Not involved in HRT-mediated hypersensitive response (HR) and resistance to TCV (PubMed-18785827). Binds DNA non specifically (PubMed-15629774). Activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP) (By similarity) (451 aa)
     
        0.716
AT1G71020
ARM repeat superfamily protein; Functions as an E3 ubiquitin ligase (628 aa)
           
  0.671
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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