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AT1G18950 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G18950" - DDT domain superfamily in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G18950DDT domain superfamily; Probable transcription regulator (750 aa)    
Predicted Functional Partners:
CHR11
Chromatin-remodeling protein 11; Possesses intrinsic ATP-dependent nucleosome-remodeling activity. Constitutes the catalytic subunit of several complexes capable of forming ordered nucleosome arrays on chromatin (By similarity). Involved in the formation of nucleosome distribution patterns (PubMed-24606212). Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte (PubMed-16286646). Required for the maintenance of the plant vegetative phase. In association with RLT1 or RLT2 may prevent the early activation of the vegetative-to-reproductive transit [...] (1057 aa)
     
      0.755
RNL
RNAligase (1104 aa)
     
   
  0.679
AT7SL-1
7SL RNA1 (270 aa)
           
  0.635
AT5G46070
Guanylate-binding protein (1082 aa)
     
        0.468
RLT1
Homeobox-1; Transcriptional regulator required for the maintenance of the plant vegetative phase. In association with CHR11 or CHR17 may prevent the early activation of the vegetative-to-reproductive transition by regulating key genes that contribute to flower timing, such as FT, SEP1, SEP3, AGL8/FUL, SOC1 and FLC (1705 aa)
     
        0.459
AT4G31880
Uncharacterized protein (873 aa)
     
        0.444
MOS1
MODIFIER OF snc1; Involved in the regulation of the chromatin structure and DNA methylation at the SNC1 locus. Regulates the expression of SNC1 at chromatin level (1427 aa)
     
        0.443
AT1G32810
RING/FYVE/PHD zinc finger protein (1068 aa)
     
        0.438
AT5G28740
pre-mRNA-splicing factor SYF1 (917 aa)
     
        0.437
TSL
TOUSLED; Required for correct initiation of floral organ primordia and for proper development of organ primordia. Phosphorylates in vitro ASF1B/SGA1, the C-terminal part of TKI1 and histone H3 (688 aa)
     
        0.437
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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