STRINGSTRING
AT1G19010 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19010" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G19010Uncharacterized protein (319 aa)    
Predicted Functional Partners:
AT1G16760
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (758 aa)
           
  0.747
AT4G19010
4-coumarate--CoA ligase-like 6 (566 aa)
           
  0.740
AT1G20490
4-coumarate--CoA ligase-like 3 (447 aa)
           
  0.732
AAE11
Acyl-activating enzyme 11; Butyrate--CoA ligase that is active in vitro with medium-chain fatty acids, with a preference for hexanoate and octanoate (572 aa)
           
  0.710
AT4G11030
Long-chain acyl-CoA synthetase; Activation of long-chain fatty acids for both synthesis of cellular lipids, and degradation via beta-oxidation. Preferentially uses palmitate, palmitoleate, oleate and linoleate (666 aa)
           
  0.678
AT5G63380
4-coumarate--CoA ligase-like 9; Contributes to jasmonic acid biosynthesis by initiating the beta-oxidative chain shortening of its precursors. Converts 12-oxo-phytodienoic acid (OPDA) into OPDA-CoA (562 aa)
           
  0.670
4CL8
4-coumarate--CoA ligase-like 8 (550 aa)
           
  0.670
AT1G20500
4-coumarate--CoA ligase-like 4 (550 aa)
           
  0.670
AT1G20480
4-coumarate--CoA ligase-like 2 (565 aa)
           
  0.670
AT4G32190
Myosin heavy chain-related protein (783 aa)
       
      0.588
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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