• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
AT1G19010 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19010" - Uncharacterized protein At1g19010 in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G19010Uncharacterized protein At1g19010; Unknown protein; BEST Arabidopsis thaliana protein match is- unknown protein (TAIR-AT1G74860.1); Has 337 Blast hits to 320 proteins in 97 species- Archae - 0; Bacteria - 14; Metazoa - 153; Fungi - 26; Plants - 76; Viruses - 0; Other Eukaryotes - 68 (source- NCBI BLink) (319 aa)    
Predicted Functional Partners:
AT4G32190
Myosin heavy chain-related protein; Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (783 aa)
       
      0.762
HSP23.6
Mitochondrion-localized small heat shock protein 23.6; AtHSP23.6-mito mRNA, nuclear gene encoding mitochondrial; Belongs to the small heat shock protein (HSP20) family (210 aa)
       
      0.762
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (10%) [HD]