STRINGSTRING
AT1G19200 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19200" - Uncharacterized protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G19200Uncharacterized protein (215 aa)    
Predicted Functional Partners:
AT5G50890
Lipase domain-containing protein (408 aa)
           
  0.635
AT3G20590
Late embryogenesis abundant hydroxyproline-rich glycoprotein (255 aa)
           
  0.633
NUDT21
Nudix hydrolase 21; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives (198 aa)
           
  0.632
RLP32
Receptor like protein 32 (868 aa)
           
  0.609
MUB4
Membrane-anchored ubiquitin-fold protein 4; May serve as docking site to facilitate the association of other proteins to the plasma membrane (120 aa)
           
  0.606
AT1G56670
GDSL esterase/lipase LIP-4 (373 aa)
           
  0.601
AT1G14890
Plant invertase/pectin methylesterase inhibitor superfamily protein (219 aa)
           
  0.591
KIN11
SNF1 kinase homolog 11; Catalytic subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase. In vitro, KIN11 exhibits kinase activity on sucrose phosphate synthase and the kinase activity is inhibited by PRL1. May be a subunit of a SCF ubiquitin ligas [...] (512 aa)
       
      0.561
KIN10
SNF1 kinase homolog 10; Catalytic subunit of the probable trimeric SNF1-related protein kinase (SnRK) complex, which may play a role in a signal transduction cascade regulating gene expression and carbohydrate metabolism in higher plants. The SnRK complex may also be involved in the regulation of fatty acid synthesis by phosphorylation of acetyl-CoA carboxylase and in assimilation of nitrogen by phosphorylating nitrate reductase. In vitro, KIN10 exhibits kinase activity on sucrose phosphate synthase and the kinase activity is inhibited by PRL1. May be a subunit of a SCF ubiquitin ligas [...] (535 aa)
       
      0.561
AT1G48405
Kinase interacting (KIP1-like) family protein; May be involved in the receptor-like kinase-mediated signal transduction pathway (297 aa)
           
  0.558
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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