STRINGSTRING
AT1G19240 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19240" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G19240Uncharacterized protein (104 aa)    
Predicted Functional Partners:
AT2G42710
Ribosomal protein L1p/L10e family (415 aa)
           
  0.862
AT5G26060
Self-incompatibility S1 family protein (154 aa)
           
  0.855
AT3G15160
Uncharacterized protein (562 aa)
           
  0.855
AT1G05550
Uncharacterized protein (385 aa)
           
  0.853
AT3G27025
Uncharacterized protein (289 aa)
           
  0.852
AT1G19070
F-box protein (83 aa)
           
  0.852
AT5G49180
Putative pectinesterase/pectinesterase inhibitor 58 58; Acts in the modification of cell walls via demethylesterification of cell wall pectin (571 aa)
           
  0.805
PLA2-DELTA
Phospholipase A2 delta; PA2 catalyzes the calcium-dependent hydrolysis of the 2- acyl groups in 3-sn-phosphoglycerides. Releases lysophospholipids (LPLs) and free fatty acids (FFAs) from membrane phospholipids in response to hormones and other external stimuli. Plays a role in pollen development and germination and tube growth (191 aa)
           
  0.801
AT4G14420
HR-like lesion-inducing protein-related (158 aa)
     
   
  0.757
AT3G06240
F-box family protein (427 aa)
           
  0.734
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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