STRINGSTRING
AT1G19380 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19380" - Uncharacterized protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G19380Uncharacterized protein (147 aa)    
Predicted Functional Partners:
AT3G57450
Uncharacterized protein (96 aa)
     
        0.835
AT2G24600
Ankyrin repeat family protein (601 aa)
     
        0.817
TCH3
TOUCH 3; Potential calcium sensor that binds calcium in vitro (324 aa)
     
        0.791
CMPG1
CYS, MET, PRO, and GLY protein 1; Functions as an E3 ubiquitin ligase (431 aa)
     
        0.763
AT2G22880
VQ motif-containing protein (114 aa)
     
        0.726
AT3G59080
Aspartyl protease family protein (535 aa)
     
        0.711
AT1G19020
Uncharacterized protein (86 aa)
     
        0.677
AT5G66050
Wound-responsive family protein (340 aa)
           
  0.676
AT5G27810
MADS-box transcription factor family protein (119 aa)
           
  0.676
AT5G24830
Pentatricopeptide repeat-containing protein (593 aa)
           
  0.676
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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