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AT1G19540 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19540" - NmrA-like negative transcriptional regulator-like protein in Arabidopsis thaliana
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G19540NmrA-like negative transcriptional regulator-like protein (310 aa)    
Predicted Functional Partners:
AT3G21920
Domain of unknown function (DUF26) (278 aa)
           
  0.708
AT1G51550
F-box/kelch-repeat protein (478 aa)
           
  0.676
AT4G39170
Sec14p-like phosphatidylinositol transfer family protein; Required for transport of secretory proteins from the Golgi complex. Catalyzes the transfer of phosphatidylinositol and phosphatidylcholine between membranes in vitro (By similarity) (614 aa)
           
  0.670
AT2G01600
ENTH/ANTH/VHS superfamily protein (571 aa)
           
  0.606
PEP7
Elicitor peptide 7; Elicitor of plant defense (85 aa)
           
  0.559
LAC8
Laccase 8; Lignin degradation and detoxification of lignin-derived products (By similarity). Involved in the flowering time inhibition (584 aa)
           
  0.556
AT2G41830
Uncharacterized protein (1025 aa)
           
  0.554
PROPEP6
Elicitor peptide 6; Elicitor of plant defense (104 aa)
           
  0.552
AT1G64360
Uncharacterized protein (85 aa)
           
  0.550
AT4G23740
Putative inactive receptor kinase (638 aa)
           
  0.512
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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