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AT1G19840 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19840" - SAUR-like auxin-responsive protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G19840SAUR-like auxin-responsive protein (153 aa)    
Predicted Functional Partners:
AILP1
Aluminum induced protein with YGL and LRDR motifs (234 aa)
           
  0.851
NVL
NO VEIN-LIKE (746 aa)
           
  0.739
AT2G17500
Auxin efflux carrier-like protein (396 aa)
     
   
  0.696
AT5G54130
Calcium-binding endonuclease/exonuclease/phosphatase family (436 aa)
           
  0.670
AT3G61720
Ca2+dependent plant phosphoribosyltransferase family protein (795 aa)
           
  0.670
UMAMIT6
Nodulin MtN21-like transporter family protein (369 aa)
           
  0.633
UMAMIT14
Nodulin MtN21-like protein (374 aa)
           
  0.633
AT1G76640
Calcium-binding protein CML39; Potential calcium sensor that binds calcium in vitro (159 aa)
           
  0.631
AT1G26270
Putative phosphatidylinositol 4-kinase type 2-beta; The phosphorylation of phosphatidylinositol (PI) to PI4P is the first committed step in the generation of phosphatidylinositol 4,5-bisphosphate (PIP2), a precursor of the second messenger inositol 1,4,5-trisphosphate (InsP3) (630 aa)
           
  0.607
NOV
NO VEIN (2729 aa)
           
  0.603
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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