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STRINGSTRING
HVA22H protein (Arabidopsis thaliana) - STRING interaction network
"HVA22H" - HVA22-like protein H in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
HVA22HHVA22-like protein H (ATHVA22H) (HVA22H); Contains the following InterPro domains- TB2/DP1/HVA22 related protein (InterPro-IPR004345); BEST Arabidopsis thaliana protein match is- Abscisic acid-responsive (TB2/DP1, HVA22) family protein (TAIR-AT5G42560.1); Has 10528 Blast hits to 8347 proteins in 778 species- Archae - 22; Bacteria - 1518; Metazoa - 4092; Fungi - 1457; Plants - 1639; Viruses - 302; Other Eukaryotes - 1498 (source- NCBI BLink) (315 aa)    
Predicted Functional Partners:
AT5G35680
Nucleic acid-binding, OB-fold-like protein; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (150 aa)
     
        0.779
AT2G04520
Putative translation initiation factor eIF-1A; Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (145 aa)
     
        0.779
UBC7
Ubiquitin-conjugating enzyme E2 7; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Involved in the formation of multiubiquitin chains. Signal the protein for selective degradation (203 aa)
     
      0.770
UBC14
Ubiquitin-conjugating enzyme 14 (UBC14); Contains the following InterPro domains- Ubiquitin-conjugating enzyme/RWD-like (InterPro-IPR016135), Ubiquitin-conjugating enzyme, E2 (InterPro-IPR000608); BEST Arabidopsis thaliana protein match is- ubiquitin carrier protein 7 (TAIR-AT5G59300.1) (201 aa)
     
      0.770
UBC13
Ubiquitin-conjugating enzyme E2 13; Accepts the ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. Involved in the formation of multiubiquitin chains. Signal the protein for selective degradation; Belongs to the ubiquitin-conjugating enzyme family (166 aa)
     
      0.770
NUDT18
Nudix hydrolase 18, mitochondrial; Probably mediates the hydrolysis of some nucleoside diphosphate derivatives; Belongs to the Nudix hydrolase family (176 aa)
     
   
  0.750
AT4G19880
Glutathione S-transferase family protein; Its function is described as molecular_function unknown; Involved in response to cadmium ion; Located in chloroplast; Expressed in 23 plant structures; Expressed during 13 growth stages; Contains the following InterPro domains- Glutathione S-transferase, predicted (InterPro-IPR016639), Glutathione S-transferase, C-terminal-like (InterPro-IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro-IPR017933), Thioredoxin-like fold (InterPro-IPR012336); BEST Arabidopsis thaliana protein match is- Glutathione S-transferase family [...] (382 aa)
           
  0.730
AT5G14602
Methyltransferase-like protein; Its function is described as molecular_function unknown; Involved in biological_process unknown; Located in endomembrane system; BEST Arabidopsis thaliana protein match is- Methyltransferase-related protein (TAIR-AT5G18150.1); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (80 aa)
     
        0.701
AT5G14600
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Its function is described as tRNA (adenine-N1-)-methyltransferase activity; Involved in tRNA methylation; Located in cellular_component unknown; Expressed in 21 plant structures; Expressed during 11 growth stages; Contains the following InterPro domains- tRNA methyltransferase complex GCD14 subunit (InterPro-IPR014816); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (318 aa)
     
        0.701
At1g17890
NAD(P)-binding Rossmann-fold superfamily protein; Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction (328 aa)
           
  0.699
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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