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AT1G19960 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G19960" - Uncharacterized protein in Arabidopsis thaliana
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
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Experiments
Databases
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[Homology]
Score
AT1G19960Uncharacterized protein (64 aa)    
Predicted Functional Partners:
PCC1
PATHOGEN AND CIRCADIAN CONTROLLED 1; Modulates resistance against pathogens including oomycetes (e.g. Hyaloperonospora parasitica and Phytophthora brassicae) and fungi (e.g. Phytophthora brassicae). Controls the abscisic acid-mediated (ABA) signaling pathways. Regulator of the flowering time in response to stress (e.g. UV-C). Regulates polar lipid content; promotes phosphatidylinositol (PI) and 18-0 but prevents 18-2 and 18-3 polar lipids accumulation (81 aa)
     
        0.630
LURP1
LURP1 protein; Involved in basal defense against virulent oomycetes. Might be related to the phospholipid scramblase and tubby-like superfamily of membrane tethered transcription factors (By similarity) (207 aa)
     
        0.601
WRKY54
WRKY DNA-binding protein 54; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (346 aa)
     
        0.518
AT5G03350
Lectin-like protein; Plays a positive role in the effector-triggered immunity (ETI) response (PubMed-19199050, PubMed-24006883). Involved in salicylic acid (SA)-mediated processes occurring in ETI response, but is not involved in the autophagy process (PubMed-24006883). Promotes systemic rather than local immunity (PubMed-24755512). Essential for systemic acquired resistance (SAR), but not necessary for immune signaling downstream of SA (PubMed-24755512). May act in parallel with SA (PubMed-24755512) (274 aa)
     
        0.489
WRKY70
WRKY DNA-binding protein 70; Transcription factor. Interacts specifically with the W box (5’-(T)TGAC[CT]-3’), a frequently occurring elicitor- responsive cis-acting element (By similarity) (294 aa)
     
        0.438
ANK
Ankyrin (426 aa)
     
        0.413
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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