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AT1G20030 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20030" - Pathogenesis-related thaumatin-like protein in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20030Pathogenesis-related thaumatin-like protein (316 aa)    
Predicted Functional Partners:
AT5G18990
Putative pectinesterase 55; Acts in the modification of cell walls via demethylesterification of cell wall pectin (330 aa)
           
  0.679
AT5G63500
Uncharacterized protein (69 aa)
           
  0.670
AT5G50560
Uncharacterized protein (67 aa)
           
  0.670
AT5G41300
Cysteine-rich repeat secretory protein 59 (287 aa)
           
  0.670
AT5G41290
Cysteine-rich repeat secretory protein 58 (287 aa)
           
  0.670
AT5G41280
Cysteine-rich repeat secretory protein 57 (286 aa)
           
  0.670
AT5G40980
Uncharacterized protein (69 aa)
           
  0.670
AT5G40960
Uncharacterized protein (68 aa)
           
  0.670
AT5G14110
Uncharacterized protein (70 aa)
           
  0.670
AT4G12950
Fasciclin-like arabinogalactan family protein (176 aa)
           
  0.670
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
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