STRINGSTRING
AT1G20120 protein (Arabidopsis thaliana) - STRING interaction network
"AT1G20120" - GDSL esterase/lipase in Arabidopsis thaliana
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AT1G20120GDSL esterase/lipase (402 aa)    
Predicted Functional Partners:
AT1G23570
Uncharacterized protein (263 aa)
     
   
  0.829
AT1G68875
Uncharacterized protein (153 aa)
     
   
  0.806
AT4G37900
Uncharacterized protein; Involved in development and stress responses, probably through an auxin-dependent mechanism (787 aa)
     
   
  0.785
GRP20
Glycine-rich protein 20 (153 aa)
     
   
  0.765
TSM1
Putative caffeoyl-CoA O-methyltransferase; Methyltransferase involved in phenylpropanoid polyamine conjugate biosynthesis. In vivo, methylates only one of the 5- hydroxyferuloyl moieties of N1,N5,N10-tri-(hydroxyferuloyl)- spermidine, while is able in vitro to convert all three 5- hydroxyferuloyl residues to the corresponding sinapoyl moieties and to methylate caffeoyl CoA and tricaffeoyl spermidine (233 aa)
     
   
  0.739
GRP19
Glycine-rich protein 19 (106 aa)
     
   
  0.692
AT3G23770
O-Glycosyl hydrolases family 17 protein (476 aa)
     
   
  0.691
PELPK2
Pro-Glu-Leu|Ile|Val-Pro-Lys 2 (130 aa)
           
  0.678
AT5G46230
Uncharacterized protein (143 aa)
           
  0.677
ATA20
Anther 20 (416 aa)
     
   
  0.675
Your Current Organism:
Arabidopsis thaliana
NCBI taxonomy Id: 3702
Other names: A. thaliana, Arabidopsis thaliana, Arabidopsis thaliana (L.) Heynh., mouse-ear cress, thale cress, thale-cress
Server load: low (11%) [HD]